Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 299 NP_036462 20 299 NP_001243397 20 299 XP_005269721 20 299 NP_872363 17 2528 XP_005271570 17 2528 XP_005271569 17 2528 XP_006718878 17 2528 XP_005271568 17 2528 NP_003292 17 4312 NP_067629 16 5631 NP_001003827 16 5631 NP_001003819 16 5631 NP_001804 16 7355 NP_001273663 16 7355 NP_055309 16 7355 NP_945347 16 7355 XP_006724029 16 7355 XP_005260981 16 7355 XP_006724028 16 7355 XP_005260979 16 7355 XP_005260978 16 7355 XP_005260977 16 7355 XP_006721103 16 7355 XP_005255314 16 7355 XP_006721102 16 7355 XP_005255313 16 7355 XP_005255312 16 7355 XP_006721101 16 7355 XP_005255311 16 7355 XP_005255310 16 7355 NP_005566 15 9605 NP_787116 15 9605 NP_001240628 15 9605 NP_001092882 15 9605 NP_006757 15 9605 NP_001092883 15 9605 NP_775821 15 9605 NP_002130 15 9605 NP_001156008 15 9605 NP_001155907 15 9605 NP_062556 15 9605 NP_001240630 15 9605 NP_001006600 15 9605 NP_061165 15 9605 NP_001240627 15 9605 NP_001240626 15 9605 XP_006717495 15 9605 XP_006717494 15 9605 XP_006717493 15 9605 XP_006717492 15 9605 XP_006717490 15 9605 XP_006717489 15 9605 XP_006717488 15 9605 XP_006717487 15 9605 XP_006717486 15 9605 XP_005251455 15 9605 XP_005251456 15 9605 XP_005251454 15 9605 XP_005273706 15 9605 XP_006714723 15 9605 XP_005248613 15 9605 XP_005248612 15 9605 XP_005248611 15 9605 NP_001009894 15 9605>NP_001243398 Length = 1781 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 SVNMNMNT Sbjct: 1689 SVNMNMNT 1696>NP_036462 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 SVNMNMNT Sbjct: 1981 SVNMNMNT 1988>NP_001243397 Length = 1890 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 SVNMNMNT Sbjct: 1798 SVNMNMNT 1805>XP_005269721 Length = 2073 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 SVNMNMNT Sbjct: 1981 SVNMNMNT 1988>NP_872363 Length = 1499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 +VNMNMN Sbjct: 775 NVNMNMN 781Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 ++NMNMN + Sbjct: 769 NLNMNMNVN 777Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 ++NMNMN Sbjct: 777 NMNMNMN 783>XP_005271570 Length = 1462 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 +VNMNMN Sbjct: 738 NVNMNMN 744Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 ++NMNMN + Sbjct: 732 NLNMNMNVN 740Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 ++NMNMN Sbjct: 740 NMNMNMN 746>XP_005271569 Length = 1462 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 +VNMNMN Sbjct: 738 NVNMNMN 744Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 ++NMNMN + Sbjct: 732 NLNMNMNVN 740Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 ++NMNMN Sbjct: 740 NMNMNMN 746>XP_006718878 Length = 1499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 +VNMNMN Sbjct: 775 NVNMNMN 781Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 ++NMNMN + Sbjct: 769 NLNMNMNVN 777Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 ++NMNMN Sbjct: 777 NMNMNMN 783>XP_005271568 Length = 1499 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 +VNMNMN Sbjct: 775 NVNMNMN 781Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 ++NMNMN + Sbjct: 769 NLNMNMNVN 777Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 ++NMNMN Sbjct: 777 NMNMNMN 783>NP_003292 Length = 398 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 + N+N+NTS Sbjct: 242 NTNLNVNTS 250>NP_067629 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 SVN+N+N Sbjct: 307 SVNLNLN 313>NP_001003827 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 SVN+N+N Sbjct: 307 SVNLNLN 313>NP_001003819 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVNMNMN 7 SVN+N+N Sbjct: 661 SVNLNLN 667>NP_001804 Length = 2701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNMN++T Sbjct: 955 TVNMNIDT 962>NP_001273663 Length = 2580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNMN++T Sbjct: 930 TVNMNIDT 937>NP_055309 Length = 1962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1520 NVNMDMNS 1527>NP_945347 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVNMNMNT 8 S+N+N NT Sbjct: 86 SLNVNFNT 93>XP_006724029 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVNMNMNT 8 S+N+N NT Sbjct: 94 SLNVNFNT 101>XP_005260981 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVNMNMNT 8 S+N+N NT Sbjct: 94 SLNVNFNT 101>XP_006724028 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVNMNMNT 8 S+N+N NT Sbjct: 94 SLNVNFNT 101>XP_005260979 Length = 459 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVNMNMNT 8 S+N+N NT Sbjct: 94 SLNVNFNT 101>XP_005260978 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVNMNMNT 8 S+N+N NT Sbjct: 94 SLNVNFNT 101>XP_005260977 Length = 489 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVNMNMNT 8 S+N+N NT Sbjct: 94 SLNVNFNT 101>XP_006721103 Length = 1597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1488 NVNMDMNS 1495>XP_005255314 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1267 NVNMDMNS 1274>XP_006721102 Length = 1820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1378 NVNMDMNS 1385>XP_005255313 Length = 1822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1380 NVNMDMNS 1387>XP_005255312 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1429 NVNMDMNS 1436>XP_006721101 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1465 NVNMDMNS 1472>XP_005255311 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1471 NVNMDMNS 1478>XP_005255310 Length = 1919 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVNMNMNT 8 +VNM+MN+ Sbjct: 1477 NVNMDMNS 1484>NP_005566 Length = 1025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 VN+NMN Sbjct: 692 VNINMN 697>NP_787116 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 VN+NMN Sbjct: 678 VNINMN 683>NP_001240628 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 763 INMNLN 768>NP_001092882 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NMNMNT 8 +MNMNT Sbjct: 1913 SMNMNT 1918>NP_006757 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NMNMNT 8 +MNMNT Sbjct: 1913 SMNMNT 1918>NP_001092883 Length = 2004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NMNMNT 8 +MNMNT Sbjct: 1913 SMNMNT 1918>NP_775821 Length = 1326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNMNTS 9 MN+NTS Sbjct: 1 MNLNTS 6>NP_002130 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 S+N NM++S Sbjct: 135 SMNFNMSSS 143>NP_001156008 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 S+N NM++S Sbjct: 135 SMNFNMSSS 143>NP_001155907 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVNMNMN 7 S+N NMN Sbjct: 225 SLNQNMN 231>NP_062556 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVNMNMNTS 9 S+N NM++S Sbjct: 135 SMNFNMSSS 143>NP_001240630 Length = 1367 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 759 INMNLN 764>NP_001006600 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 763 INMNLN 768>NP_061165 Length = 1371 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 763 INMNLN 768>NP_001240627 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 763 INMNLN 768>NP_001240626 Length = 1412 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 763 INMNLN 768>XP_006717495 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 773 NMNRNTT 779>XP_006717494 Length = 1571 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 272 NMNRNTT 278>XP_006717493 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 311 NMNRNTT 317>XP_006717492 Length = 1635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 773 NMNRNTT 779>XP_006717490 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 492 NMNRNTT 498>XP_006717489 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 773 NMNRNTT 779>XP_006717488 Length = 2031 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 773 NMNRNTT 779>XP_006717487 Length = 2071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 773 NMNRNTT 779>XP_006717486 Length = 2072 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NMNMNTS 9 NMN NT+ Sbjct: 773 NMNRNTT 779>XP_005251455 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNMNTS 9 MN+NTS Sbjct: 1 MNLNTS 6>XP_005251456 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNMNTS 9 MN+NTS Sbjct: 1 MNLNTS 6>XP_005251454 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNMNTS 9 MN+NTS Sbjct: 1 MNLNTS 6>XP_005273706 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NMNMNT 8 +MNMNT Sbjct: 1906 SMNMNT 1911>XP_006714723 Length = 1246 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 763 INMNLN 768>XP_005248613 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 763 INMNLN 768>XP_005248612 Length = 1456 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 759 INMNLN 764>XP_005248611 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 763 INMNLN 768>NP_001009894 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VNMNMN 7 +NMN+N Sbjct: 287 INMNLN 292Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.0986 0.237 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 397,023 Number of extensions: 663 Number of successful extensions: 75 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |