Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002196 17 2528 XP_005255993 17 2528 XP_005255990 17 2528 XP_005255989 17 2528 XP_005255965 17 2528 XP_006721242 17 2528 XP_005255963 17 2528 XP_006715629 17 3301 XP_006711843 17 3301 NP_078970 17 3301 NP_064621 17 3301 NP_004251 17 4312 NP_004442 17 4312 NP_001269380 17 4312 NP_001269379 17 4312 XP_006726609 17 4312 XP_005255919 17 4312 XP_005255918 17 4312 XP_005255917 17 4312 XP_005255916 17 4312 XP_006719787 17 4312 XP_006718513 17 4312 XP_006718512 17 4312 XP_005275822 17 4312 XP_006710027 17 4312 NP_003629 16 5631 NP_001278423 16 5631 NP_055415 16 5631 NP_001166246 16 5631 NP_690004 16 5631 NP_001265318 16 5631 NP_644670 16 5631 NP_001265317 16 5631 NP_001265316 16 5631 NP_001070952 16 5631 NP_109599 16 5631 NP_001010912 16 5631 NP_055661 16 7355 NP_775323 16 7355 NP_001164643 16 7355 NP_001164642 16 7355 NP_001164645 16 7355 NP_001328 16 7355 NP_003023 16 7355 NP_056467 16 7355 NP_001258733 16 7355 NP_002616 16 7355 NP_001258780 16 7355 NP_055524 16 7355 NP_659419 16 7355 XP_005251177 16 7355 XP_005247777 16 7355 XP_005247776 16 7355 XP_005247774 16 7355 XP_006713797 16 7355 NP_001966 15 9605 NP_004949 15 9605 NP_001013725 15 9605 NP_057222 15 9605 NP_002290 15 9605 NP_001177912 15 9605 NP_001497 15 9605 NP_004720 15 9605 NP_001164607 15 9605 NP_001164606 15 9605 NP_695001 15 9605 NP_056009 15 9605 NP_542138 15 9605 XP_005261548 15 9605 XP_005261547 15 9605 XP_005260723 15 9605 XP_006723606 15 9605 XP_005255090 15 9605 XP_005254450 15 9605 XP_005254449 15 9605 XP_005263496 15 9605 XP_005263495 15 9605 NP_056185 15 9605>NP_002196 Length = 1049 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLQKIWAA 9 VLQ +WAA Sbjct: 442 VLQPLWAA 449>XP_005255993 Length = 416 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVLQ +WA Sbjct: 154 SVLQLVWA 161>XP_005255990 Length = 451 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVLQ +WA Sbjct: 154 SVLQLVWA 161>XP_005255989 Length = 455 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVLQ +WA Sbjct: 154 SVLQLVWA 161>XP_005255965 Length = 416 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVLQ +WA Sbjct: 154 SVLQLVWA 161>XP_006721242 Length = 451 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVLQ +WA Sbjct: 154 SVLQLVWA 161>XP_005255963 Length = 455 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVLQ +WA Sbjct: 154 SVLQLVWA 161>XP_006715629 Length = 1667 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LQKIWA 8 LQK+WA Sbjct: 943 LQKVWA 948>XP_006711843 Length = 410 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LQKIWA 8 LQK+WA Sbjct: 372 LQKVWA 377>NP_078970 Length = 1667 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LQKIWA 8 LQK+WA Sbjct: 943 LQKVWA 948>NP_064621 Length = 325 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVLQKIW 7 S++QKIW Sbjct: 182 SLIQKIW 188>NP_004251 Length = 1208 Score = 16.5 bits (31), Expect = 4312 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVLQKIWAA 9 SVLQKI AA Sbjct: 564 SVLQKIRAA 572>NP_004442 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVLQ +W Sbjct: 259 SVLQSVW 265>NP_001269380 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVLQ +W Sbjct: 258 SVLQSVW 264>NP_001269379 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVLQ +W Sbjct: 259 SVLQSVW 265>XP_006726609 Length = 2838 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 VLQK+W Sbjct: 1497 VLQKLW 1502>XP_005255919 Length = 1860 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVL+ +WA Sbjct: 525 SVLEDVWA 532>XP_005255918 Length = 1949 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVL+ +WA Sbjct: 525 SVLEDVWA 532>XP_005255917 Length = 1984 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVL+ +WA Sbjct: 525 SVLEDVWA 532>XP_005255916 Length = 2022 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVL+ +WA Sbjct: 525 SVLEDVWA 532>XP_006719787 Length = 2838 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 VLQK+W Sbjct: 1497 VLQKLW 1502>XP_006718513 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVLQ +W Sbjct: 327 SVLQSVW 333>XP_006718512 Length = 492 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVLQ +W Sbjct: 328 SVLQSVW 334>XP_005275822 Length = 800 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLQKIWA 8 SVL+ +WA Sbjct: 474 SVLEDVWA 481>XP_006710027 Length = 2837 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 VLQK+W Sbjct: 1496 VLQKLW 1501>NP_003629 Length = 1063 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLQKIWAA 9 VLQ +WA+ Sbjct: 436 VLQGVWAS 443>NP_001278423 Length = 1048 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLQKIWAA 9 VLQ +WA+ Sbjct: 421 VLQGVWAS 428>NP_055415 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVL KIW Sbjct: 479 SVLGKIW 485>NP_001166246 Length = 627 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVL KIW Sbjct: 82 SVLGKIW 88>NP_690004 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVL KIW Sbjct: 82 SVLGKIW 88>NP_001265318 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKIWAA 9 Q+IWAA Sbjct: 451 QRIWAA 456>NP_644670 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 SVL KIW Sbjct: 482 SVLGKIW 488>NP_001265317 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKIWAA 9 Q+IWAA Sbjct: 451 QRIWAA 456>NP_001265316 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKIWAA 9 Q+IWAA Sbjct: 451 QRIWAA 456>NP_001070952 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKIWAA 9 Q+IWAA Sbjct: 451 QRIWAA 456>NP_109599 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QKIWAA 9 Q+IWAA Sbjct: 451 QRIWAA 456>NP_001010912 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQKIWAA 9 L+KIW A Sbjct: 139 LEKIWTA 145>NP_055661 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QKIWAA 9 QKIW A Sbjct: 938 QKIWTA 943>NP_775323 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQKIW Sbjct: 109 LQKIW 113>NP_001164643 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 VLQ+IW Sbjct: 182 VLQEIW 187>NP_001164642 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 VLQ+IW Sbjct: 182 VLQEIW 187>NP_001164645 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 VLQ+IW Sbjct: 214 VLQEIW 219>NP_001328 Length = 355 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 VLQ+IW Sbjct: 182 VLQEIW 187>NP_003023 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQKIW Sbjct: 109 LQKIW 113>NP_056467 Length = 1247 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LQKIWA 8 +QK+WA Sbjct: 944 MQKLWA 949>NP_001258733 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQKIW Sbjct: 13 LQKIW 17>NP_002616 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQKIW Sbjct: 13 LQKIW 17>NP_001258780 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SVLQKIW 7 S +QKIW Sbjct: 75 SSIQKIW 81>NP_055524 Length = 3546 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 +LQ+IW Sbjct: 2627 ILQRIW 2632>NP_659419 Length = 1989 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 ++QKIW Sbjct: 1780 IVQKIW 1785>XP_005251177 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 QKIWAA 9 QKIW A Sbjct: 790 QKIWTA 795>XP_005247777 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQKIW Sbjct: 109 LQKIW 113>XP_005247776 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQKIW Sbjct: 109 LQKIW 113>XP_005247774 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQKIW Sbjct: 109 LQKIW 113>XP_006713797 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQKIW Sbjct: 109 LQKIW 113>NP_001966 Length = 434 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LQKIWA 8 ++KIWA Sbjct: 3 IEKIWA 8>NP_004949 Length = 2549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 LQKIWAA 9 LQK W A Sbjct: 1265 LQKAWGA 1271>NP_001013725 Length = 1649 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SVLQKIWAA 9 ++ QK+W A Sbjct: 1414 NLTQKLWTA 1422>NP_057222 Length = 217 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 V+QK+W Sbjct: 82 VIQKMW 87>NP_002290 Length = 1927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SVLQKIWAA 9 S Q+IW A Sbjct: 357 SAYQRIWEA 365>NP_001177912 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 V+QK+W Sbjct: 44 VIQKMW 49>NP_001497 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SVLQKIWA 8 SVL +WA Sbjct: 142 SVLYPVWA 149>NP_004720 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 VLQKIW 7 VLQK W Sbjct: 604 VLQKYW 609>NP_001164607 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 VLQKIW 7 VLQK W Sbjct: 604 VLQKYW 609>NP_001164606 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 VLQKIW 7 VLQK W Sbjct: 604 VLQKYW 609>NP_695001 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SVLQKIW 7 ++LQK+W Sbjct: 284 ALLQKMW 290>NP_056009 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 3 LQKIW 7 LQK+W Sbjct: 705 LQKVW 709>NP_542138 Length = 362 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SVLQKIW 7 ++LQK+W Sbjct: 283 ALLQKMW 289>XP_005261548 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SVLQKIWAA 9 ++ QK+W A Sbjct: 138 AIKQKLWEA 146>XP_005261547 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SVLQKIWAA 9 ++ QK+W A Sbjct: 201 AIKQKLWEA 209>XP_005260723 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SVLQKIW 7 ++LQK+W Sbjct: 249 ALLQKMW 255>XP_006723606 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 SVLQKIW 7 ++LQK+W Sbjct: 231 ALLQKMW 237>XP_005255090 Length = 203 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 VLQKIW 7 V+QK+W Sbjct: 68 VIQKMW 73>XP_005254450 Length = 1505 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SVLQKIWAA 9 ++ QK+W A Sbjct: 1414 NLTQKLWTA 1422>XP_005254449 Length = 1626 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SVLQKIWAA 9 ++ QK+W A Sbjct: 1414 NLTQKLWTA 1422>XP_005263496 Length = 2322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 LQKIWAA 9 LQK W A Sbjct: 1038 LQKAWGA 1044>XP_005263495 Length = 2549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 LQKIWAA 9 LQK W A Sbjct: 1265 LQKAWGA 1271>NP_056185 Length = 290 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 SVLQKIWAA 9 ++ QK+W A Sbjct: 242 AIKQKLWEA 250Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.122 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 668,366 Number of extensions: 908 Number of successful extensions: 78 Number of sequences better than 10000.0: 78 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 78 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |