Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_036292 17 3301 NP_001265645 17 3301 XP_005266987 17 3301 XP_006715521 17 3301 NP_001273331 16 5631 NP_000237 16 5631 XP_006720946 16 5631 XP_005255380 16 5631 XP_006720945 16 5631 XP_006720944 16 5631 XP_005255378 16 5631 XP_005255377 16 5631 XP_006720943 16 5631 NP_002438 15 9605 NP_001231866 15 9605 NP_001258978 15 9605 NP_057376 15 9605 NP_004332 15 9605 NP_005087 15 9605 NP_001164634 15 9605 NP_001164633 15 9605 NP_963893 15 9605 NP_775862 15 9605 XP_005262367 15 9605 XP_006724778 15 9605 XP_005262366 15 9605 XP_005268859 15 9605 XP_006717649 15 9605 XP_006717648 15 9605 XP_006717645 15 9605 XP_006717642 15 9605 XP_006717640 15 9605 XP_006717639 15 9605 XP_006717638 15 9605 XP_006717637 15 9605 XP_006717636 15 9605 XP_006717635 15 9605 XP_006717634 15 9605 XP_006717633 15 9605 XP_006717632 15 9605 XP_006717631 15 9605 XP_005269471 15 9605 XP_006717630 15 9605 XP_006717629 15 9605 XP_005269469 15 9605 XP_005269468 15 9605 XP_006717628 15 9605 XP_006717627 15 9605 XP_006717626 15 9605 XP_006717625 15 9605 XP_006717624 15 9605 XP_005269463 15 9605 XP_005269461 15 9605 XP_006717623 15 9605 XP_005269462 15 9605 XP_005265227 15 9605 XP_005264615 15 9605 XP_006712164 15 9605 XP_005264614 15 9605 XP_005264613 15 9605 XP_005264612 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLGTRMTS 9 VLGTRMTS Sbjct: 1865 VLGTRMTS 1872>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VLGTRMTS 9 VLGTRMTS Sbjct: 1660 VLGTRMTS 1667>NP_036292 Length = 621 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 +LGTRM S Sbjct: 566 ILGTRMVS 573>NP_001265645 Length = 621 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 +LGTRM S Sbjct: 566 ILGTRMVS 573>XP_005266987 Length = 597 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 +LGTRM S Sbjct: 542 ILGTRMVS 549>XP_006715521 Length = 621 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 +LGTRM S Sbjct: 566 ILGTRMVS 573>NP_001273331 Length = 1131 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 835 SFLGTRLT 842>NP_000237 Length = 1130 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 834 SFLGTRLT 841>XP_006720946 Length = 1081 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 785 SFLGTRLT 792>XP_005255380 Length = 1082 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 786 SFLGTRLT 793>XP_006720945 Length = 1096 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 800 SFLGTRLT 807>XP_006720944 Length = 1097 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 801 SFLGTRLT 808>XP_005255378 Length = 1145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 849 SFLGTRLT 856>XP_005255377 Length = 1146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 850 SFLGTRLT 857>XP_006720943 Length = 1208 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 912 SFLGTRLT 919>NP_002438 Length = 1400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 180 SPLGTRVT 187>NP_001231866 Length = 1351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 180 SPLGTRVT 187>NP_001258978 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVLGTRMTS 9 +VLG+R+T+ Sbjct: 535 NVLGSRVTN 543>NP_057376 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVLGTRMTS 9 +VLG+R+T+ Sbjct: 588 NVLGSRVTN 596>NP_004332 Length = 2225 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLGTRMTS 9 VLG MTS Sbjct: 1277 VLGVEMTS 1284>NP_005087 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S +GT+MT Sbjct: 303 SAVGTKMT 310>NP_001164634 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S +GT+MT Sbjct: 303 SAVGTKMT 310>NP_001164633 Length = 1358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S +GT+MT Sbjct: 303 SAVGTKMT 310>NP_963893 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S +GT+MT Sbjct: 303 SAVGTKMT 310>NP_775862 Length = 2344 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLGTRMTS 9 VLG MTS Sbjct: 1220 VLGANMTS 1227>XP_005262367 Length = 1358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S +GT+MT Sbjct: 303 SAVGTKMT 310>XP_006724778 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S +GT+MT Sbjct: 303 SAVGTKMT 310>XP_005262366 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S +GT+MT Sbjct: 303 SAVGTKMT 310>XP_005268859 Length = 2361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLGTRMTS 9 VLG MTS Sbjct: 1237 VLGANMTS 1244>XP_006717649 Length = 1213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717648 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717645 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717642 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717640 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 318 VLGPRVTS 325>XP_006717639 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717638 Length = 1511 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717637 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717636 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717635 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717634 Length = 1549 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717633 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717632 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 315 VLGPRVTS 322>XP_006717631 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 318 VLGPRVTS 325>XP_005269471 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 318 VLGPRVTS 325>XP_006717630 Length = 1561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717629 Length = 1563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 327 VLGPRVTS 334>XP_005269469 Length = 1563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 327 VLGPRVTS 334>XP_005269468 Length = 1563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 327 VLGPRVTS 334>XP_006717628 Length = 1570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717627 Length = 1573 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717626 Length = 1574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717625 Length = 1575 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717624 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_005269463 Length = 1586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 350 VLGPRVTS 357>XP_005269461 Length = 1595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_006717623 Length = 1595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_005269462 Length = 1595 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLGTRMTS 9 VLG R+TS Sbjct: 359 VLGPRVTS 366>XP_005265227 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVLGTRMT 8 S LGTR+T Sbjct: 180 SPLGTRVT 187>XP_005264615 Length = 2162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLGTRMTS 9 VLG MTS Sbjct: 1214 VLGVEMTS 1221>XP_006712164 Length = 2179 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLGTRMTS 9 VLG MTS Sbjct: 1214 VLGVEMTS 1221>XP_005264614 Length = 2191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLGTRMTS 9 VLG MTS Sbjct: 1277 VLGVEMTS 1284>XP_005264613 Length = 2208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLGTRMTS 9 VLG MTS Sbjct: 1277 VLGVEMTS 1284>XP_005264612 Length = 2242 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VLGTRMTS 9 VLG MTS Sbjct: 1277 VLGVEMTS 1284Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.118 0.292 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 375,664 Number of extensions: 464 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |