Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 18 1482 NP_009297 18 1482 NP_057090 17 3301 NP_001035282 17 3301 NP_060303 17 3301 XP_006725461 17 3301 XP_006724090 17 3301 NP_000203 17 4312 NP_055847 16 5631 XP_005266355 16 5631 XP_005266354 16 5631 XP_005266353 16 5631 XP_005266352 16 5631 NP_001804 16 7355 NP_958441 16 7355 NP_009148 16 7355 NP_958439 16 7355 NP_665858 16 7355 NP_665859 16 7355 NP_005219 16 7355 NP_001273663 16 7355 NP_848555 16 7355 XP_005260719 16 7355 XP_006723605 16 7355 XP_006723604 16 7355 XP_005247145 16 7355 XP_005247144 16 7355 XP_005247143 16 7355 XP_006713548 16 7355 NP_212134 15 9605 NP_001238892 15 9605 NP_001238891 15 9605 NP_056410 15 9605 NP_653259 15 9605 NP_001113 15 9605 NP_775961 15 9605 NP_001138349 15 9605 XP_006725061 15 9605 XP_005262426 15 9605 XP_005262425 15 9605 XP_006723601 15 9605 XP_005260712 15 9605 XP_006716782 15 9605>NP_005148 Length = 1130 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 SVKEISD V Sbjct: 1120 SVKEISDIV 1128>NP_009297 Length = 1149 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 SVKEISD V Sbjct: 1139 SVKEISDIV 1147>NP_057090 Length = 349 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKEI DTV Sbjct: 341 VKEICDTV 348>NP_001035282 Length = 388 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KEISDTV 9 KEISDT+ Sbjct: 261 KEISDTI 267>NP_060303 Length = 388 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KEISDTV 9 KEISDT+ Sbjct: 261 KEISDTI 267>XP_006725461 Length = 388 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KEISDTV 9 KEISDT+ Sbjct: 261 KEISDTI 267>XP_006724090 Length = 388 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KEISDTV 9 KEISDT+ Sbjct: 261 KEISDTI 267>NP_000203 Length = 788 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SVKEISDT 8 SVKE+ DT Sbjct: 667 SVKELKDT 674>NP_055847 Length = 1447 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKEISD + Sbjct: 19 VKEISDKI 26>XP_005266355 Length = 1448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKEISD + Sbjct: 19 VKEISDKI 26>XP_005266354 Length = 1411 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKEISD + Sbjct: 19 VKEISDKI 26>XP_005266353 Length = 1445 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKEISD + Sbjct: 19 VKEISDKI 26>XP_005266352 Length = 1446 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKEISD + Sbjct: 19 VKEISDKI 26>NP_001804 Length = 2701 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVKEISDT 8 +VKE+S+T Sbjct: 1294 NVKEVSET 1301>NP_958441 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVKEISD 7 S+KEISD Sbjct: 452 SLKEISD 458>NP_009148 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 ++KE+ DTV Sbjct: 137 AIKELLDTV 145>NP_958439 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVKEISD 7 S+KEISD Sbjct: 452 SLKEISD 458>NP_665858 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 ++KE+ DTV Sbjct: 137 AIKELLDTV 145>NP_665859 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 ++KE+ DTV Sbjct: 137 AIKELLDTV 145>NP_005219 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVKEISD 7 S+KEISD Sbjct: 452 SLKEISD 458>NP_001273663 Length = 2580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVKEISDT 8 +VKE+S+T Sbjct: 1269 NVKEVSET 1276>NP_848555 Length = 197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VKEISDT 8 VKEI DT Sbjct: 86 VKEIGDT 92>XP_005260719 Length = 145 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VKEISDT 8 VKEI DT Sbjct: 86 VKEIGDT 92>XP_006723605 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VKEISDT 8 VKEI DT Sbjct: 64 VKEIGDT 70>XP_006723604 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VKEISDT 8 VKEI DT Sbjct: 86 VKEIGDT 92>XP_005247145 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 ++KE+ DTV Sbjct: 137 AIKELLDTV 145>XP_005247144 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 ++KE+ DTV Sbjct: 137 AIKELLDTV 145>XP_005247143 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 ++KE+ DTV Sbjct: 137 AIKELLDTV 145>XP_006713548 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 ++KE+ DTV Sbjct: 137 AIKELLDTV 145>NP_212134 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 +V EISD+V Sbjct: 168 NVTEISDSV 176>NP_001238892 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KEISDTV 9 KE+SDT+ Sbjct: 469 KELSDTM 475>NP_001238891 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KEISDTV 9 KE+SDT+ Sbjct: 469 KELSDTM 475>NP_056410 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KEISDTV 9 KE+SDT+ Sbjct: 469 KELSDTM 475>NP_653259 Length = 2073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKE+SD + Sbjct: 2024 VKELSDII 2031>NP_001113 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 S KE+SD++ Sbjct: 362 SFKEVSDSL 370>NP_775961 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKE+SD + Sbjct: 225 VKELSDEI 232>NP_001138349 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKE+SD + Sbjct: 202 VKELSDEI 209>XP_006725061 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KEISDTV 9 KE+SDT+ Sbjct: 469 KELSDTM 475>XP_005262426 Length = 2055 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKE+SD + Sbjct: 2006 VKELSDII 2013>XP_005262425 Length = 2086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VKEISDTV 9 VKE+SD + Sbjct: 2037 VKELSDII 2044>XP_006723601 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 +V EISD+V Sbjct: 168 NVTEISDSV 176>XP_005260712 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 +V EISD+V Sbjct: 168 NVTEISDSV 176>XP_006716782 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVKEISDTV 9 S KE+SD++ Sbjct: 362 SFKEVSDSL 370Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.296 0.115 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 453,237 Number of extensions: 766 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |