Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_001135799 17 3301 NP_001135798 17 3301 NP_066968 17 3301 XP_006716269 17 3301 XP_006716267 17 3301 XP_006716266 17 3301 XP_005250791 17 3301 XP_006716265 17 3301 XP_006716264 17 3301 XP_006716263 17 3301 XP_006716262 17 3301 XP_006716261 17 3301 XP_006716260 17 3301 XP_006714257 17 4312 XP_005263005 17 4312 XP_006714254 17 4312 XP_006714253 17 4312 XP_005263002 17 4312 XP_005262999 17 4312 XP_006714252 17 4312 XP_006714251 17 4312 XP_006714250 17 4312 NP_060887 16 5631 NP_001161221 16 5631 XP_005245386 16 5631 XP_006711512 16 5631 NP_857597 16 5631 NP_001156002 16 7355 XP_005271262 16 7355 XP_006710965 16 7355 XP_006710964 16 7355 XP_005271261 16 7355 NP_078952 16 7355 NP_003676 15 9605 NP_001159719 15 9605 NP_068775 15 9605 NP_786944 15 9605 NP_203129 15 9605 NP_000822 15 9605 NP_001116242 15 9605 NP_954672 15 9605 NP_835258 15 9605 NP_055379 15 9605 NP_057669 15 9605 XP_005259725 15 9605 XP_005259626 15 9605 XP_005263467 15 9605 XP_005267003 15 9605 XP_006715528 15 9605 XP_005267002 15 9605 XP_006711641 15 9605 XP_005245604 15 9605 XP_005245603 15 9605 XP_001718723 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV PRTTMT Sbjct: 1594 SVTPRTTMT 1602>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV PRTTMT Sbjct: 1389 SVTPRTTMT 1397>NP_001135799 Length = 760 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 716 SVLPLTTLT 724>NP_001135798 Length = 672 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 628 SVLPLTTLT 636>NP_066968 Length = 760 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 716 SVLPLTTLT 724>XP_006716269 Length = 501 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 457 SVLPLTTLT 465>XP_006716267 Length = 726 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 682 SVLPLTTLT 690>XP_006716266 Length = 726 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 682 SVLPLTTLT 690>XP_005250791 Length = 760 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 716 SVLPLTTLT 724>XP_006716265 Length = 760 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 716 SVLPLTTLT 724>XP_006716264 Length = 767 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 723 SVLPLTTLT 731>XP_006716263 Length = 767 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 723 SVLPLTTLT 731>XP_006716262 Length = 767 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 723 SVLPLTTLT 731>XP_006716261 Length = 767 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 723 SVLPLTTLT 731>XP_006716260 Length = 767 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 SV+P TT+T Sbjct: 723 SVLPLTTLT 731>XP_006714257 Length = 4145 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 4081 SIIKRTTMS 4089>XP_005263005 Length = 2019 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 1955 SIIKRTTMS 1963>XP_006714254 Length = 2049 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 1985 SIIKRTTMS 1993>XP_006714253 Length = 2069 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 2005 SIIKRTTMS 2013>XP_005263002 Length = 4072 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 4008 SIIKRTTMS 4016>XP_005262999 Length = 4147 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 4083 SIIKRTTMS 4091>XP_006714252 Length = 4153 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 4089 SIIKRTTMS 4097>XP_006714251 Length = 4165 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 4101 SIIKRTTMS 4109>XP_006714250 Length = 4190 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 S+I RTTM+ Sbjct: 4126 SIIKRTTMS 4134>NP_060887 Length = 1610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++PR TMT Sbjct: 1448 NLLPRRTMT 1456>NP_001161221 Length = 1457 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++PR TMT Sbjct: 1295 NLLPRRTMT 1303>XP_005245386 Length = 1518 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++PR TMT Sbjct: 1356 NLLPRRTMT 1364>XP_006711512 Length = 1547 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++PR TMT Sbjct: 1448 NLLPRRTMT 1456>NP_857597 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SVIPRTT 7 S IPRTT Sbjct: 995 SAIPRTT 1001>NP_001156002 Length = 756 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+IP T+T Sbjct: 432 SIIPEETLT 440>XP_005271262 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+IP T+T Sbjct: 229 SIIPEETLT 237>XP_006710965 Length = 770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+IP T+T Sbjct: 432 SIIPEETLT 440>XP_006710964 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+IP T+T Sbjct: 432 SIIPEETLT 440>XP_005271261 Length = 806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+IP T+T Sbjct: 432 SIIPEETLT 440>NP_078952 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+IP T+T Sbjct: 321 SIIPEETLT 329>NP_003676 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PRTTMT 9 PRT+MT Sbjct: 141 PRTSMT 146>NP_001159719 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++P TT+T Sbjct: 69 TLLPNTTLT 77>NP_068775 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++P TT+T Sbjct: 69 TLLPNTTLT 77>NP_786944 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++P TT+T Sbjct: 69 TLLPNTTLT 77>NP_203129 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PRTTMT 9 PRTT+T Sbjct: 160 PRTTIT 165>NP_000822 Length = 919 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++P TT+T Sbjct: 72 TLLPNTTLT 80>NP_001116242 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+ P TT+T Sbjct: 463 SISPETTVT 471>NP_954672 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IPRTTMT 9 +P TTMT Sbjct: 111 LPSTTMT 117>NP_835258 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PRTTMT 9 PRTT+T Sbjct: 160 PRTTIT 165>NP_055379 Length = 402 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PRTTMT 9 PRTT+T Sbjct: 165 PRTTIT 170>NP_057669 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IPRTTMT 9 +P TTMT Sbjct: 111 LPSTTMT 117>XP_005259725 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PRTTMT 9 PRT+MT Sbjct: 141 PRTSMT 146>XP_005259626 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IPRTTMT 9 +P TTMT Sbjct: 147 LPSTTMT 153>XP_005263467 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PRTTMT 9 PRTT+T Sbjct: 149 PRTTIT 154>XP_005267003 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++P TT+T Sbjct: 20 TLLPNTTLT 28>XP_006715528 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++P TT+T Sbjct: 69 TLLPNTTLT 77>XP_005267002 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 +++P TT+T Sbjct: 69 TLLPNTTLT 77>XP_006711641 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+ P TT+T Sbjct: 463 SISPETTVT 471>XP_005245604 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+ P TT+T Sbjct: 463 SISPETTVT 471>XP_005245603 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIPRTTMT 9 S+ P TT+T Sbjct: 463 SISPETTVT 471>XP_001718723 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SVIPRTTMT 9 ++ P+TT+T Sbjct: 527 AITPKTTVT 535Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.121 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 595,241 Number of extensions: 924 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |