Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004203 18 1482 NP_001121619 18 1935 NP_000258 18 1935 NP_001035957 18 1935 XP_006721991 18 1935 XP_006721990 18 1935 XP_006721989 18 1935 XP_005258041 18 1935 XP_006721988 18 1935 XP_006721987 18 1935 XP_006721986 18 1935 XP_005258040 18 1935 XP_006721985 18 1935 NP_872577 16 5631 NP_001136239 16 5631 NP_001136238 16 5631 NP_149045 16 5631 NP_000341 16 5631 NP_000186 16 5631 XP_005269816 16 5631 XP_005269815 16 5631 XP_005269813 16 5631 XP_005269814 16 5631 XP_005269812 16 5631 NP_001004731 16 5631 NP_057336 16 7355 NP_001073950 16 7355 XP_005267232 16 7355 XP_005267230 16 7355 XP_005267229 16 7355 XP_005267228 16 7355 XP_005267227 16 7355 XP_005267226 16 7355 XP_006712120 16 7355 XP_005264512 16 7355 XP_005264511 16 7355 XP_006712119 16 7355 XP_005264510 16 7355 XP_006712118 16 7355 XP_005264509 16 7355 XP_005264508 16 7355 XP_006712117 16 7355 XP_005264507 16 7355 XP_005264506 16 7355 NP_056041 15 9605 NP_114072 15 9605 NP_006181 15 9605 NP_001230332 15 9605 XP_006721523 15 9605 XP_006720933 15 9605 XP_005255273 15 9605 XP_005255272 15 9605 XP_005255271 15 9605 XP_005255270 15 9605 XP_005255268 15 9605 XP_005255267 15 9605 XP_006712618 15 9605 XP_006711828 15 9605 XP_006711827 15 9605 XP_006711826 15 9605 NP_001026976 15 9605 NP_001001966 15 9605>NP_004203 Length = 658 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 VIFLLVHS 9 VIF+LVHS Sbjct: 114 VIFVLVHS 121>NP_001121619 Length = 593 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>NP_000258 Length = 2818 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>NP_001035957 Length = 2839 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>XP_006721991 Length = 1632 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>XP_006721990 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>XP_006721989 Length = 2823 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>XP_005258041 Length = 2836 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>XP_006721988 Length = 2846 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>XP_006721987 Length = 2849 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>XP_006721986 Length = 2854 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 327 SVIFLLVQS 335>XP_005258040 Length = 2857 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>XP_006721985 Length = 2867 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 SVIFLLV S Sbjct: 340 SVIFLLVQS 348>NP_872577 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLLVHS 9 FLLVHS Sbjct: 210 FLLVHS 215>NP_001136239 Length = 1915 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S++FLL H Sbjct: 1415 SILFLLYH 1422>NP_001136238 Length = 1952 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S++FLL H Sbjct: 1452 SILFLLYH 1459>NP_149045 Length = 1955 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S++FLL H Sbjct: 1455 SILFLLYH 1462>NP_000341 Length = 2273 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SVIFLLVHS 9 SV++LL++S Sbjct: 176 SVVYLLINS 184>NP_000186 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLLVHS 9 FLLVHS Sbjct: 210 FLLVHS 215>XP_005269816 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLLVHS 9 FLLVHS Sbjct: 87 FLLVHS 92>XP_005269815 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLLVHS 9 FLLVHS Sbjct: 210 FLLVHS 215>XP_005269813 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLLVHS 9 FLLVHS Sbjct: 210 FLLVHS 215>XP_005269814 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLLVHS 9 FLLVHS Sbjct: 210 FLLVHS 215>XP_005269812 Length = 700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FLLVHS 9 FLLVHS Sbjct: 210 FLLVHS 215>NP_001004731 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFLLVH 8 V+FLL+H Sbjct: 95 VMFLLIH 101>NP_057336 Length = 4857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3714 ALLFLLCHS 3722>NP_001073950 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIFLLVHS 9 S +FL +HS Sbjct: 253 SALFLFLHS 261>XP_005267232 Length = 437 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIFLLVHS 9 S +FL +HS Sbjct: 253 SALFLFLHS 261>XP_005267230 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIFLLVHS 9 S +FL +HS Sbjct: 88 SALFLFLHS 96>XP_005267229 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIFLLVHS 9 S +FL +HS Sbjct: 253 SALFLFLHS 261>XP_005267228 Length = 813 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIFLLVHS 9 S +FL +HS Sbjct: 252 SALFLFLHS 260>XP_005267227 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIFLLVHS 9 S +FL +HS Sbjct: 253 SALFLFLHS 261>XP_005267226 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SVIFLLVHS 9 S +FL +HS Sbjct: 253 SALFLFLHS 261>XP_006712120 Length = 4812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3669 ALLFLLCHS 3677>XP_005264512 Length = 4840 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3697 ALLFLLCHS 3705>XP_005264511 Length = 4847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3741 ALLFLLCHS 3749>XP_006712119 Length = 4851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3708 ALLFLLCHS 3716>XP_005264510 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3718 ALLFLLCHS 3726>XP_006712118 Length = 4864 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3721 ALLFLLCHS 3729>XP_005264509 Length = 4870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3727 ALLFLLCHS 3735>XP_005264508 Length = 4875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3732 ALLFLLCHS 3740>XP_006712117 Length = 4878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3735 ALLFLLCHS 3743>XP_005264507 Length = 4880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3737 ALLFLLCHS 3745>XP_005264506 Length = 4884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SVIFLLVHS 9 +++FLL HS Sbjct: 3741 ALLFLLCHS 3749>NP_056041 Length = 1053 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 318 SQVFLIIH 325>NP_114072 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVIFLLVH 8 +V+FLLV+ Sbjct: 397 TVVFLLVY 404>NP_006181 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IFLLVHS 9 +FLL+H+ Sbjct: 388 LFLLIHN 394>NP_001230332 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 316 SQVFLIIH 323>XP_006721523 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SVIFLLV 7 SV+FLLV Sbjct: 31 SVLFLLV 37>XP_006720933 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 318 SQVFLIIH 325>XP_005255273 Length = 884 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 318 SQVFLIIH 325>XP_005255272 Length = 925 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 318 SQVFLIIH 325>XP_005255271 Length = 998 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 318 SQVFLIIH 325>XP_005255270 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 316 SQVFLIIH 323>XP_005255268 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 318 SQVFLIIH 325>XP_005255267 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SVIFLLVH 8 S +FL++H Sbjct: 316 SQVFLIIH 323>XP_006712618 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IFLLVHS 9 +FLL+H+ Sbjct: 388 LFLLIHN 394>XP_006711828 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SVIFLLVH 8 S++FLL++ Sbjct: 49 SILFLLIY 56>XP_006711827 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SVIFLLVH 8 S++FLL++ Sbjct: 26 SILFLLIY 33>XP_006711826 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SVIFLLVH 8 S++FLL++ Sbjct: 49 SILFLLIY 56>NP_001026976 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFLLVH 8 +IFL+VH Sbjct: 493 LIFLVVH 499>NP_001001966 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SVIFLLVH 8 S++FLL++ Sbjct: 26 SILFLLIY 33Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.149 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,405 Number of extensions: 868 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |