Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 18 1135 NP_001164560 17 2528 NP_001186732 17 4312 NP_077298 17 4312 NP_001338 17 4312 NP_085146 17 4312 NP_663693 17 4312 XP_006712165 17 4312 NP_056471 17 4312 NP_006028 16 5631 NP_001019554 16 5631 NP_055718 16 5631 XP_006719740 16 5631 XP_006719739 16 5631 XP_006719738 16 5631 XP_005269272 16 5631 XP_006712943 16 5631 XP_006712942 16 5631 XP_006712941 16 5631 XP_006712940 16 5631 NP_001278253 16 7355 NP_001158238 16 7355 NP_008816 16 7355 NP_003120 16 7355 XP_006722053 16 7355 XP_006722052 16 7355 XP_005256014 16 7355 XP_005251866 16 7355 XP_005251865 16 7355 XP_005251864 16 7355 NP_055745 16 7355 NP_008941 15 9605 NP_001278405 15 9605 NP_001984 15 9605 NP_620416 15 9605 NP_001188394 15 9605 NP_001137468 15 9605 NP_004530 15 9605 NP_001107580 15 9605 NP_775798 15 9605 NP_003282 15 9605 NP_001243537 15 9605 XP_006725362 15 9605 XP_006722616 15 9605 XP_005266833 15 9605 XP_005266831 15 9605 XP_005266830 15 9605 XP_005266757 15 9605 XP_006721713 15 9605 XP_005267440 15 9605 XP_005267439 15 9605 XP_005267438 15 9605 XP_005254130 15 9605 XP_005254129 15 9605 XP_005254128 15 9605 XP_005254127 15 9605 XP_005247772 15 9605>NP_004295 Length = 1620 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVHKLRRAK 9 SV KLRRAK Sbjct: 131 SVRKLRRAK 139>NP_001164560 Length = 869 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SVHKLRRA 8 S+HKLR+A Sbjct: 802 SLHKLRKA 809>NP_001186732 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VHKLRRAK 9 +HKLRR + Sbjct: 46 IHKLRRLR 53>NP_077298 Length = 300 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VHKLRRAK 9 +HKLRR + Sbjct: 52 IHKLRRLR 59>NP_001338 Length = 942 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VHKLRRAK 9 VH LR+AK Sbjct: 910 VHMLRKAK 917>NP_085146 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VHKLRRAK 9 VH LRR+K Sbjct: 244 VHTLRRSK 251>NP_663693 Length = 351 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VHKLRRAK 9 VH LRR+K Sbjct: 247 VHTLRRSK 254>XP_006712165 Length = 300 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VHKLRRAK 9 +HKLRR + Sbjct: 52 IHKLRRLR 59>NP_056471 Length = 1882 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VHKLRRAK 9 +H+LRR K Sbjct: 722 IHRLRRKK 729>NP_006028 Length = 1084 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 S+HKLR+ Sbjct: 452 SIHKLRQ 458>NP_001019554 Length = 2385 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VHKLRR 7 +HKLRR Sbjct: 1571 IHKLRR 1576>NP_055718 Length = 2363 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VHKLRR 7 +HKLRR Sbjct: 1571 IHKLRR 1576>XP_006719740 Length = 1863 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VHKLRR 7 +HKLRR Sbjct: 1071 IHKLRR 1076>XP_006719739 Length = 2306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VHKLRR 7 +HKLRR Sbjct: 1514 IHKLRR 1519>XP_006719738 Length = 2340 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VHKLRR 7 +HKLRR Sbjct: 1548 IHKLRR 1553>XP_005269272 Length = 2356 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VHKLRR 7 +HKLRR Sbjct: 1571 IHKLRR 1576>XP_006712943 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 S+HKLR+ Sbjct: 430 SIHKLRQ 436>XP_006712942 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 S+HKLR+ Sbjct: 430 SIHKLRQ 436>XP_006712941 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 S+HKLR+ Sbjct: 457 SIHKLRQ 463>XP_006712940 Length = 1108 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 S+HKLR+ Sbjct: 476 SIHKLRQ 482>NP_001278253 Length = 2639 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HKLRRAK 9 HKL RAK Sbjct: 2212 HKLLRAK 2218>NP_001158238 Length = 2789 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VHKLRRA 8 +HKL+RA Sbjct: 656 LHKLKRA 662>NP_008816 Length = 3703 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VHKLRRA 8 +HKL+RA Sbjct: 1570 LHKLKRA 1576>NP_003120 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SVHKLRRA 8 S+H+LR+A Sbjct: 483 SLHQLRKA 490>XP_006722053 Length = 2608 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HKLRRAK 9 HKL RAK Sbjct: 2181 HKLLRAK 2187>XP_006722052 Length = 2631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 HKLRRAK 9 HKL RAK Sbjct: 2204 HKLLRAK 2210>XP_005256014 Length = 3702 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VHKLRRA 8 +HKL+RA Sbjct: 1569 LHKLKRA 1575>XP_005251866 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 SVH++RR Sbjct: 327 SVHRVRR 333>XP_005251865 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 SVH++RR Sbjct: 388 SVHRVRR 394>XP_005251864 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 SVH++RR Sbjct: 389 SVHRVRR 395>NP_055745 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SVHKLRR 7 SVH++RR Sbjct: 389 SVHRVRR 395>NP_008941 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HK+RRA Sbjct: 345 HKVRRA 350>NP_001278405 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HK+RRA Sbjct: 237 HKVRRA 242>NP_001984 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVHKLRRA 8 S+HK R+A Sbjct: 273 SLHKCRKA 280>NP_620416 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HKLRR+ Sbjct: 418 HKLRRS 423>NP_001188394 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HKLRR+ Sbjct: 418 HKLRRS 423>NP_001137468 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SVHKLR 6 SVHK+R Sbjct: 65 SVHKIR 70>NP_004530 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VHKLRR 7 VH+LRR Sbjct: 134 VHRLRR 139>NP_001107580 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VHKLRRAK 9 +H L+RAK Sbjct: 347 LHDLKRAK 354>NP_775798 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HKLRRAK 9 H+LRRA+ Sbjct: 75 HQLRRAQ 81>NP_003282 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVHKLRRA 8 +VH +RRA Sbjct: 474 TVHSVRRA 481>NP_001243537 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VHKLRRA 8 VHKLR A Sbjct: 318 VHKLRPA 324>XP_006725362 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HK+RRA Sbjct: 159 HKVRRA 164>XP_006722616 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HKLRR+ Sbjct: 243 HKLRRS 248>XP_005266833 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HKLRR+ Sbjct: 418 HKLRRS 423>XP_005266831 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HKLRR+ Sbjct: 418 HKLRRS 423>XP_005266830 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HKLRR+ Sbjct: 418 HKLRRS 423>XP_005266757 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VHKLRR 7 VH+LRR Sbjct: 133 VHRLRR 138>XP_006721713 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 HKLRRA 8 HK+RRA Sbjct: 159 HKVRRA 164>XP_005267440 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HKLRRAK 9 H+LRRA+ Sbjct: 75 HQLRRAQ 81>XP_005267439 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HKLRRAK 9 H+LRRA+ Sbjct: 107 HQLRRAQ 113>XP_005267438 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HKLRRAK 9 H+LRRA+ Sbjct: 107 HQLRRAQ 113>XP_005254130 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVHKLRRA 8 +VH +RRA Sbjct: 474 TVHSVRRA 481>XP_005254129 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVHKLRRA 8 +VH +RRA Sbjct: 474 TVHSVRRA 481>XP_005254128 Length = 1291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVHKLRRA 8 +VH +RRA Sbjct: 474 TVHSVRRA 481>XP_005254127 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVHKLRRA 8 +VH +RRA Sbjct: 474 TVHSVRRA 481>XP_005247772 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 SVHKLRRAK 9 +VH+LR+++ Sbjct: 660 TVHELRKSR 668Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.127 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 616,584 Number of extensions: 857 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |