Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_361014                                                              20     509
NP_001243998                                                           20     509
NP_079461                                                              17    4312
XP_005257260                                                           17    4312
XP_005257258                                                           17    4312
XP_006721872                                                           17    4312
XP_006721871                                                           17    4312
XP_006721870                                                           17    4312
XP_006721869                                                           17    4312
XP_006713297                                                           17    4312
XP_006713296                                                           17    4312
XP_006713295                                                           17    4312
XP_005265345                                                           17    4312
XP_006713294                                                           17    4312
XP_006713293                                                           17    4312
XP_006713292                                                           17    4312
XP_006713291                                                           17    4312
XP_006713290                                                           17    4312
XP_006713289                                                           17    4312
XP_006713286                                                           17    4312
XP_005265332                                                           17    4312
XP_006713285                                                           17    4312
XP_006713284                                                           17    4312
XP_006713283                                                           17    4312
NP_056139                                                              16    5631
XP_005276373                                                           16    5631
XP_005253460                                                           16    5631
XP_006719161                                                           16    5631
XP_006719160                                                           16    5631
NP_060558                                                              16    5631
NP_001184033                                                           16    7355
NP_005924                                                              16    7355
NP_116206                                                              16    7355
NP_006363                                                              16    7355
NP_002838                                                              16    7355
NP_055803                                                              16    7355
NP_001276053                                                           16    7355
NP_001276051                                                           16    7355
NP_001106191                                                           16    7355
NP_001106190                                                           16    7355
NP_001106189                                                           16    7355
NP_001106188                                                           16    7355
NP_001095869                                                           16    7355
NP_001095868                                                           16    7355
NP_001095867                                                           16    7355
NP_005817                                                              16    7355
NP_085046                                                              16    7355
NP_001001851                                                           16    7355
NP_001153147                                                           16    7355
XP_006718903                                                           16    7355
XP_006718902                                                           16    7355
XP_006716138                                                           16    7355
XP_005248694                                                           16    7355
XP_005248693                                                           16    7355
XP_006714061                                                           16    7355
XP_005248132                                                           16    7355
XP_005248131                                                           16    7355
XP_005248130                                                           16    7355
XP_005248129                                                           16    7355
XP_006714060                                                           16    7355
XP_005248128                                                           16    7355
XP_005248127                                                           16    7355
XP_005248126                                                           16    7355
XP_005248125                                                           16    7355
XP_005248124                                                           16    7355
XP_005248123                                                           16    7355
XP_005248122                                                           16    7355
XP_005248121                                                           16    7355
XP_005248120                                                           16    7355
XP_006714059                                                           16    7355
XP_005248119                                                           16    7355
XP_005248118                                                           16    7355
XP_005248117                                                           16    7355
XP_005248116                                                           16    7355
XP_005248115                                                           16    7355
XP_005248114                                                           16    7355
XP_005245771                                                           16    7355
XP_005245769                                                           16    7355
XP_005245770                                                           16    7355
XP_005245768                                                           16    7355
NP_570857                                                              16    7355
NP_570858                                                              16    7355
XP_005248275                                                           15    9605
>NP_361014
          Length = 707

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  SVGSKRRQT 9
          SVGSKRR+T
Sbjct: 7  SVGSKRRRT 15
>NP_001243998
          Length = 176

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1  SVGSKRRQT 9
          SVGSKRR+T
Sbjct: 7  SVGSKRRRT 15
>NP_079461
          Length = 1990

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            SVGS  RQT
Sbjct: 1473 SVGSPTRQT 1481
>XP_005257260
          Length = 1990

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            SVGS  RQT
Sbjct: 1473 SVGSPTRQT 1481
>XP_005257258
          Length = 2000

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            SVGS  RQT
Sbjct: 1483 SVGSPTRQT 1491
>XP_006721872
          Length = 2037

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            SVGS  RQT
Sbjct: 1520 SVGSPTRQT 1528
>XP_006721871
          Length = 2037

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            SVGS  RQT
Sbjct: 1520 SVGSPTRQT 1528
>XP_006721870
          Length = 2064

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            SVGS  RQT
Sbjct: 1547 SVGSPTRQT 1555
>XP_006721869
          Length = 2074

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            SVGS  RQT
Sbjct: 1557 SVGSPTRQT 1565
>XP_006713297
          Length = 1600

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713296
          Length = 1615

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713295
          Length = 1620

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_005265345
          Length = 1627

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713294
          Length = 1652

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713293
          Length = 1667

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713292
          Length = 1670

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713291
          Length = 1682

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713290
          Length = 1690

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713289
          Length = 1697

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713286
          Length = 1707

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_005265332
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713285
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713284
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>XP_006713283
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1  SVGSKRRQ 8
          S+GSKRR+
Sbjct: 18 SMGSKRRR 25
>NP_056139
          Length = 456

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3  GSKRRQ 8
          GSKRRQ
Sbjct: 34 GSKRRQ 39
>XP_005276373
          Length = 487

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S+G K RQT
Sbjct: 219 SLGPKERQT 227
>XP_005253460
          Length = 464

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S+G K RQT
Sbjct: 196 SLGPKERQT 204
>XP_006719161
          Length = 464

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S+G K RQT
Sbjct: 196 SLGPKERQT 204
>XP_006719160
          Length = 483

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S+G K RQT
Sbjct: 215 SLGPKERQT 223
>NP_060558
          Length = 464

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S+G K RQT
Sbjct: 196 SLGPKERQT 204
>NP_001184033
          Length = 3972

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            S+GS+R  T
Sbjct: 2192 SIGSRRHST 2200
>NP_005924
          Length = 3969

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            S+GS+R  T
Sbjct: 2189 SIGSRRHST 2197
>NP_116206
          Length = 728

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   VGSKRRQT 9
           VG+K RQT
Sbjct: 93  VGTKLRQT 100
>NP_006363
          Length = 623

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 575 SKRRQT 580
>NP_002838
          Length = 1015

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SVGSKRR 7
           SVGS+RR
Sbjct: 132 SVGSERR 138
>NP_055803
          Length = 1083

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>NP_001276053
          Length = 910

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SVGSKRRQT 9
          S GS+ RQT
Sbjct: 48 SFGSRSRQT 56
>NP_001276051
          Length = 1069

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>NP_001106191
          Length = 890

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SVGSKRRQT 9
          S GS+ RQT
Sbjct: 53 SFGSRSRQT 61
>NP_001106190
          Length = 902

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SVGSKRRQT 9
          S GS+ RQT
Sbjct: 53 SFGSRSRQT 61
>NP_001106189
          Length = 1056

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>NP_001106188
          Length = 1057

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>NP_001095869
          Length = 535

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 485 SKRRQT 490
>NP_001095868
          Length = 636

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 586 SKRRQT 591
>NP_001095867
          Length = 532

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 482 SKRRQT 487
>NP_005817
          Length = 633

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 583 SKRRQT 588
>NP_085046
          Length = 942

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   VGSKRRQT 9
           VG+K RQT
Sbjct: 307 VGTKLRQT 314
>NP_001001851
          Length = 702

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   VGSKRRQT 9
           VG+K RQT
Sbjct: 307 VGTKLRQT 314
>NP_001153147
          Length = 588

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 540 SKRRQT 545
>XP_006718903
          Length = 2673

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S+GS+R  T
Sbjct: 893 SIGSRRHST 901
>XP_006718902
          Length = 2964

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    SVGSKRRQT 9
            S+GS+R  T
Sbjct: 1184 SIGSRRHST 1192
>XP_006716138
          Length = 858

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SVGSKRR 7
           SVGS+RR
Sbjct: 132 SVGSERR 138
>XP_005248694
          Length = 623

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 575 SKRRQT 580
>XP_005248693
          Length = 525

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 477 SKRRQT 482
>XP_006714061
          Length = 766

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248132
          Length = 1044

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248131
          Length = 1070

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248130
          Length = 1074

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248129
          Length = 1082

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_006714060
          Length = 1085

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248128
          Length = 1086

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248127
          Length = 1322

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248126
          Length = 1359

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248125
          Length = 1439

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248124
          Length = 1467

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SVGSKRRQT 9
          S GS+ RQT
Sbjct: 48 SFGSRSRQT 56
>XP_005248123
          Length = 1471

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SVGSKRRQT 9
          S GS+ RQT
Sbjct: 48 SFGSRSRQT 56
>XP_005248122
          Length = 1471

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  SVGSKRRQT 9
          S GS+ RQT
Sbjct: 48 SFGSRSRQT 56
>XP_005248121
          Length = 1543

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 120 SFGSRSRQT 128
>XP_005248120
          Length = 1549

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_006714059
          Length = 1600

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248119
          Length = 1601

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248118
          Length = 1602

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248117
          Length = 1626

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248116
          Length = 1627

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248115
          Length = 1629

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005248114
          Length = 1630

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SVGSKRRQT 9
           S GS+ RQT
Sbjct: 207 SFGSRSRQT 215
>XP_005245771
          Length = 494

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 444 SKRRQT 449
>XP_005245769
          Length = 595

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 545 SKRRQT 550
>XP_005245770
          Length = 595

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 545 SKRRQT 550
>XP_005245768
          Length = 633

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   SKRRQT 9
           SKRRQT
Sbjct: 583 SKRRQT 588
>NP_570857
          Length = 998

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SVGSKRR 7
           SVGS+RR
Sbjct: 115 SVGSERR 121
>NP_570858
          Length = 986

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SVGSKRR 7
           SVGS+RR
Sbjct: 132 SVGSERR 138
>XP_005248275
          Length = 136

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VGSKRRQ 8
           VG+KR+Q
Sbjct: 127 VGNKRKQ 133
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.305    0.114    0.282 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 604,299
Number of extensions: 1198
Number of successful extensions: 83
Number of sequences better than 10000.0: 83
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 83
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)

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