Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 20 299 NP_003310 18 1935 NP_597676 18 1935 NP_001243779 18 1935 NP_596869 18 1935 XP_005246888 18 1935 XP_006712788 18 1935 XP_006712787 18 1935 XP_006712786 18 1935 NP_001254479 18 1935 NP_597681 18 1935 XP_005256084 17 4312 XP_005256083 17 4312 XP_005256082 17 4312 XP_006715529 17 4312 NP_060766 17 4312 NP_054880 17 4312 NP_001157745 16 5631 NP_001074010 16 5631 XP_005254311 16 5631 XP_006720508 16 5631 XP_006720507 16 5631 XP_005254310 16 5631 XP_005254309 16 5631 XP_005254306 16 5631 XP_005254305 16 5631 XP_005254304 16 5631 XP_005254303 16 5631 XP_006720506 16 5631 XP_005254302 16 5631 XP_005254301 16 5631 XP_006720505 16 5631 XP_005254300 16 5631 NP_055815 16 7355 NP_009202 16 7355 NP_071926 16 7355 XP_005253400 16 7355 XP_006719122 16 7355 XP_005253399 16 7355 XP_006719121 16 7355 XP_006715053 16 7355 XP_006715052 16 7355 XP_006715051 16 7355 XP_005248896 16 7355 XP_005268557 16 7355 XP_006714856 16 7355 XP_005268556 16 7355 XP_006714855 16 7355 XP_006714854 16 7355 XP_005268555 16 7355 XP_005268554 16 7355 NP_055861 15 9605 NP_001139317 15 9605 NP_598334 15 9605 NP_002932 15 9605 NP_055990 15 9605 NP_001123292 15 9605 XP_005258025 15 9605 XP_005272230 15 9605 XP_005272229 15 9605 XP_005272228 15 9605 XP_005265867 15 9605 XP_005265868 15 9605 XP_005265869 15 9605 XP_005265866 15 9605 XP_005265865 15 9605 XP_005265864 15 9605 XP_006713341 15 9605 XP_006713340 15 9605 XP_006713339 15 9605 XP_006713135 15 9605 NP_001124336 15 9605>NP_004110 Length = 993 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SVARKDTGY 9 SVAR DTGY Sbjct: 319 SVARNDTGY 327>NP_003310 Length = 26926 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 12464 VTRKDSGY 12471>NP_597676 Length = 27051 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 12589 VTRKDSGY 12596>NP_001243779 Length = 34350 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 19888 VTRKDSGY 19895>NP_596869 Length = 33423 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 18961 VTRKDSGY 18968>XP_005246888 Length = 22663 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 8201 VTRKDSGY 8208>XP_006712788 Length = 24022 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 9560 VTRKDSGY 9567>XP_006712787 Length = 33978 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 19516 VTRKDSGY 19523>XP_006712786 Length = 35484 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 21022 VTRKDSGY 21029>NP_001254479 Length = 35991 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 21529 VTRKDSGY 21536>NP_597681 Length = 27118 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V RKD+GY Sbjct: 12656 VTRKDSGY 12663>XP_005256084 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VARKDTGY 9 V RKDT Y Sbjct: 109 VVRKDTDY 116>XP_005256083 Length = 607 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VARKDTGY 9 V RKDT Y Sbjct: 109 VVRKDTDY 116>XP_005256082 Length = 647 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VARKDTGY 9 V RKDT Y Sbjct: 109 VVRKDTDY 116>XP_006715529 Length = 129 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVARKDTGY 9 SVARK+ G+ Sbjct: 60 SVARKERGW 68>NP_060766 Length = 754 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VARKDTGY 9 V RKDT Y Sbjct: 109 VVRKDTDY 116>NP_054880 Length = 180 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SVARKDTGY 9 SVARK+ G+ Sbjct: 60 SVARKERGW 68>NP_001157745 Length = 3065 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2720 LANKDSGY 2727>NP_001074010 Length = 2856 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2511 LANKDSGY 2518>XP_005254311 Length = 1627 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 1282 LANKDSGY 1289>XP_006720508 Length = 2658 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2313 LANKDSGY 2320>XP_006720507 Length = 2763 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2418 LANKDSGY 2425>XP_005254310 Length = 2906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2561 LANKDSGY 2568>XP_005254309 Length = 2956 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2611 LANKDSGY 2618>XP_005254306 Length = 3066 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2721 LANKDSGY 2728>XP_005254305 Length = 3114 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2769 LANKDSGY 2776>XP_005254304 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2770 LANKDSGY 2777>XP_005254303 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2770 LANKDSGY 2777>XP_006720506 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2770 LANKDSGY 2777>XP_005254302 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2770 LANKDSGY 2777>XP_005254301 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2770 LANKDSGY 2777>XP_006720505 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2770 LANKDSGY 2777>XP_005254300 Length = 3115 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 +A KD+GY Sbjct: 2770 LANKDSGY 2777>NP_055815 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 107 VQKKDTGH 114>NP_009202 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 106 VQKKDTGH 113>NP_071926 Length = 1544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 AR+D GY Sbjct: 241 AREDAGY 247>XP_005253400 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 107 VQKKDTGH 114>XP_006719122 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 55 VQKKDTGH 62>XP_005253399 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 66 VQKKDTGH 73>XP_006719121 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 107 VQKKDTGH 114>XP_006715053 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 106 VQKKDTGH 113>XP_006715052 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 106 VQKKDTGH 113>XP_006715051 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 106 VQKKDTGH 113>XP_005248896 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VARKDTGY 9 V +KDTG+ Sbjct: 106 VQKKDTGH 113>XP_005268557 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 AR+D GY Sbjct: 241 AREDAGY 247>XP_006714856 Length = 1346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 AR+D GY Sbjct: 43 AREDAGY 49>XP_005268556 Length = 1466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 AR+D GY Sbjct: 163 AREDAGY 169>XP_006714855 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 AR+D GY Sbjct: 241 AREDAGY 247>XP_006714854 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 AR+D GY Sbjct: 183 AREDAGY 189>XP_005268555 Length = 1524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 AR+D GY Sbjct: 241 AREDAGY 247>XP_005268554 Length = 1531 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 AR+D GY Sbjct: 241 AREDAGY 247>NP_055861 Length = 2677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARKDTG 8 +RKDTG Sbjct: 825 SRKDTG 830>NP_001139317 Length = 1551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SVARKDTGY 9 +V R D GY Sbjct: 381 NVQRSDVGY 389>NP_598334 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SVARKDTGY 9 +V R D GY Sbjct: 381 NVQRSDVGY 389>NP_002932 Length = 1651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SVARKDTGY 9 +V R D GY Sbjct: 417 NVQRSDVGY 425>NP_055990 Length = 2754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 A+KD GY Sbjct: 16 AQKDLGY 22>NP_001123292 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SVARKDTGY 9 S ARK GY Sbjct: 371 SSARKSPGY 379>XP_005258025 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SVARKDTGY 9 S ARK GY Sbjct: 371 SSARKSPGY 379>XP_005272230 Length = 2706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARKDTG 8 +RKDTG Sbjct: 825 SRKDTG 830>XP_005272229 Length = 2706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARKDTG 8 +RKDTG Sbjct: 825 SRKDTG 830>XP_005272228 Length = 2706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARKDTG 8 +RKDTG Sbjct: 825 SRKDTG 830>XP_005265867 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVARKDTG 8 +V+RKD G Sbjct: 460 TVSRKDNG 467>XP_005265868 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVARKDTG 8 +V+RKD G Sbjct: 460 TVSRKDNG 467>XP_005265869 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVARKDTG 8 +V+RKD G Sbjct: 460 TVSRKDNG 467>XP_005265866 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVARKDTG 8 +V+RKD G Sbjct: 460 TVSRKDNG 467>XP_005265865 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVARKDTG 8 +V+RKD G Sbjct: 460 TVSRKDNG 467>XP_005265864 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVARKDTG 8 +V+RKD G Sbjct: 460 TVSRKDNG 467>XP_006713341 Length = 1600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SVARKDTGY 9 +V R D GY Sbjct: 366 NVQRSDVGY 374>XP_006713340 Length = 1615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SVARKDTGY 9 +V R D GY Sbjct: 381 NVQRSDVGY 389>XP_006713339 Length = 1616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 SVARKDTGY 9 +V R D GY Sbjct: 382 NVQRSDVGY 390>XP_006713135 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 ARKDTGY 9 A+KD GY Sbjct: 16 AQKDLGY 22>NP_001124336 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SVARKDTG 8 +V+RKD G Sbjct: 677 TVSRKDNG 684Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.126 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 549,984 Number of extensions: 658 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |