Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 19 869 NP_001243397 19 869 XP_005269721 19 869 NP_001138498 17 2528 NP_001166028 17 3301 NP_005886 17 3301 NP_001269105 17 3301 NP_001269104 17 3301 NP_001285 17 3301 XP_005266224 17 3301 XP_006719803 17 3301 XP_005266222 17 3301 XP_005266221 17 3301 XP_006719802 17 3301 XP_006719801 17 3301 XP_006719800 17 3301 XP_006719799 17 3301 XP_005266219 17 3301 XP_005274178 17 3301 XP_005274177 17 3301 XP_005274175 17 3301 NP_065731 17 3301 NP_001041683 17 3301 NP_001575 17 4312 XP_005253170 17 4312 XP_006718367 17 4312 XP_005253169 17 4312 XP_005253168 17 4312 XP_005253167 17 4312 NP_112196 16 5631 NP_001189352 16 5631 NP_073577 15 9605 NP_001106710 15 9605 NP_006353 15 9605 XP_006718483 15 9605 XP_006718482 15 9605 XP_006718481 15 9605 XP_006715999 15 9605 XP_006715998 15 9605 XP_006715997 15 9605>NP_036462 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 STYISAST 8 STYISAST Sbjct: 417 STYISAST 424>NP_001243397 Length = 1890 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 STYISAST 8 STYISAST Sbjct: 417 STYISAST 424>XP_005269721 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 STYISAST 8 STYISAST Sbjct: 417 STYISAST 424>NP_001138498 Length = 2299 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S Y++ASTR Sbjct: 920 SAYVTASTR 928>NP_001166028 Length = 1134 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 318 SSYSSASTR 326>NP_005886 Length = 1498 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 318 SSYSSASTR 326>NP_001269105 Length = 567 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 STYI +ST+ Sbjct: 359 STYIESSTK 367>NP_001269104 Length = 655 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 STYI +ST+ Sbjct: 447 STYIESSTK 455>NP_001285 Length = 669 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 STYI +ST+ Sbjct: 461 STYIESSTK 469>XP_005266224 Length = 1307 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 127 SSYSSASTR 135>XP_006719803 Length = 1407 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 227 SSYSSASTR 235>XP_005266222 Length = 1458 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 278 SSYSSASTR 286>XP_005266221 Length = 1458 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 278 SSYSSASTR 286>XP_006719802 Length = 1458 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 278 SSYSSASTR 286>XP_006719801 Length = 1498 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 318 SSYSSASTR 326>XP_006719800 Length = 1498 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 318 SSYSSASTR 326>XP_006719799 Length = 1498 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 318 SSYSSASTR 326>XP_005266219 Length = 1498 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STYISASTR 9 S+Y SASTR Sbjct: 318 SSYSSASTR 326>XP_005274178 Length = 780 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TYISASTR 9 +Y+SASTR Sbjct: 457 SYLSASTR 464>XP_005274177 Length = 781 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TYISASTR 9 +Y+SASTR Sbjct: 457 SYLSASTR 464>XP_005274175 Length = 807 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TYISASTR 9 +Y+SASTR Sbjct: 457 SYLSASTR 464>NP_065731 Length = 808 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TYISASTR 9 +Y+SASTR Sbjct: 457 SYLSASTR 464>NP_001041683 Length = 791 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TYISASTR 9 +Y+SASTR Sbjct: 457 SYLSASTR 464>NP_001575 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STYISAST 8 +TYI+AST Sbjct: 265 TTYINAST 272>XP_005253170 Length = 196 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STYISAST 8 +TYI+AST Sbjct: 167 TTYINAST 174>XP_006718367 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STYISAST 8 +TYI+AST Sbjct: 191 TTYINAST 198>XP_005253169 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STYISAST 8 +TYI+AST Sbjct: 265 TTYINAST 272>XP_005253168 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STYISAST 8 +TYI+AST Sbjct: 265 TTYINAST 272>XP_005253167 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STYISAST 8 +TYI+AST Sbjct: 265 TTYINAST 272>NP_112196 Length = 733 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STYISAST 8 S+YI+AST Sbjct: 214 SSYIAAST 221>NP_001189352 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 STYISAST 8 S+YI+AST Sbjct: 58 SSYIAAST 65>NP_073577 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TYISAS 7 TYISAS Sbjct: 1171 TYISAS 1176>NP_001106710 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TYISAS 7 TYISAS Sbjct: 1144 TYISAS 1149>NP_006353 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STYISA 6 STYISA Sbjct: 335 STYISA 340>XP_006718483 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STYISA 6 STYISA Sbjct: 335 STYISA 340>XP_006718482 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STYISA 6 STYISA Sbjct: 335 STYISA 340>XP_006718481 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STYISA 6 STYISA Sbjct: 335 STYISA 340>XP_006715999 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TYISAS 7 TYISAS Sbjct: 1143 TYISAS 1148>XP_006715998 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TYISAS 7 TYISAS Sbjct: 1164 TYISAS 1169>XP_006715997 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TYISAS 7 TYISAS Sbjct: 1170 TYISAS 1175Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.104 0.246 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 312,385 Number of extensions: 326 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |