Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 19 869 NP_001120972 19 869 XP_006716054 19 869 XP_006716053 19 869 XP_006716052 19 869 XP_006716051 19 869 NP_001274152 17 2528 NP_054858 17 2528 NP_071351 16 7355 NP_079355 15 9605 NP_000120 15 9605 NP_036516 15 9605 NP_001139433 15 9605 NP_005063 15 9605 NP_001139436 15 9605 NP_001139435 15 9605 NP_001139434 15 9605 NP_976224 15 9605 NP_071903 15 9605 NP_001136336 15 9605 NP_872393 15 9605 XP_006724219 15 9605 XP_006724218 15 9605 XP_006724217 15 9605 XP_006723839 15 9605 XP_005260259 15 9605 XP_006721417 15 9605 XP_006721416 15 9605 XP_005254432 15 9605 XP_006720566 15 9605 XP_005249616 15 9605 XP_005249615 15 9605 XP_005249613 15 9605 XP_005249612 15 9605 XP_006715073 15 9605 XP_006712515 15 9605 XP_006712514 15 9605 XP_006712513 15 9605 XP_006712512 15 9605 XP_006712511 15 9605 XP_006712510 15 9605 XP_006712509 15 9605 XP_005246533 15 9605 XP_006712508 15 9605 XP_006710989 15 9605 XP_005271283 15 9605 NP_115893 15 9605 NP_689726 15 9605>NP_000236 Length = 1390 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 STVLGKLIV 9 STVLGK+IV Sbjct: 917 STVLGKVIV 925>NP_001120972 Length = 1408 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 STVLGKLIV 9 STVLGK+IV Sbjct: 935 STVLGKVIV 943>XP_006716054 Length = 960 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 STVLGKLIV 9 STVLGK+IV Sbjct: 487 STVLGKVIV 495>XP_006716053 Length = 960 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 STVLGKLIV 9 STVLGK+IV Sbjct: 487 STVLGKVIV 495>XP_006716052 Length = 1409 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 STVLGKLIV 9 STVLGK+IV Sbjct: 936 STVLGKVIV 944>XP_006716051 Length = 1427 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 STVLGKLIV 9 STVLGK+IV Sbjct: 954 STVLGKVIV 962>NP_001274152 Length = 1791 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TVLGKLIV 9 TV+GKL+V Sbjct: 795 TVIGKLVV 802>NP_054858 Length = 1791 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TVLGKLIV 9 TV+GKL+V Sbjct: 795 TVIGKLVV 802>NP_071351 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVLGKLI 8 TVLGK+I Sbjct: 2255 TVLGKVI 2261>NP_079355 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STVLGKLI 8 +TVLG+L+ Sbjct: 79 NTVLGELV 86>NP_000120 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STVLGKLIV 9 +T +GKLIV Sbjct: 458 ATHIGKLIV 466>NP_036516 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STVLGK 6 STVLGK Sbjct: 407 STVLGK 412>NP_001139433 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STVLGKLI 8 S++LGKL+ Sbjct: 80 SSLLGKLV 87>NP_005063 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STVLGKLI 8 S++LGKL+ Sbjct: 80 SSLLGKLV 87>NP_001139436 Length = 1054 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STVLGKLI 8 S++LGKL+ Sbjct: 49 SSLLGKLV 56>NP_001139435 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STVLGKLI 8 S++LGKL+ Sbjct: 74 SSLLGKLV 81>NP_001139434 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STVLGKLI 8 S++LGKL+ Sbjct: 82 SSLLGKLV 89>NP_976224 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STVLGK 6 STVLGK Sbjct: 247 STVLGK 252>NP_071903 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TVLGKLIV 9 TV+G+L+V Sbjct: 218 TVMGQLLV 225>NP_001136336 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TVLGKL 7 TVLGKL Sbjct: 2026 TVLGKL 2031>NP_872393 Length = 3234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006724219 Length = 1157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TVLGKLI 8 T+LGKL+ Sbjct: 156 TLLGKLV 162>XP_006724218 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TVLGKLI 8 T+LGKL+ Sbjct: 156 TLLGKLV 162>XP_006724217 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TVLGKLI 8 T+LGKL+ Sbjct: 156 TLLGKLV 162>XP_006723839 Length = 452 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STVLGK 6 STVLGK Sbjct: 329 STVLGK 334>XP_005260259 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STVLGK 6 STVLGK Sbjct: 407 STVLGK 412>XP_006721417 Length = 2497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TVLGKL 7 TVLGKL Sbjct: 2002 TVLGKL 2007>XP_006721416 Length = 2504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TVLGKL 7 TVLGKL Sbjct: 2009 TVLGKL 2014>XP_005254432 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STVLGK 6 STVLGK Sbjct: 64 STVLGK 69>XP_006720566 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 STVLGK 6 STVLGK Sbjct: 247 STVLGK 252>XP_005249616 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TVLGKLIV 9 TV+G+L+V Sbjct: 66 TVMGQLLV 73>XP_005249615 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TVLGKLIV 9 TV+G+L+V Sbjct: 218 TVMGQLLV 225>XP_005249613 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TVLGKLIV 9 TV+G+L+V Sbjct: 66 TVMGQLLV 73>XP_005249612 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TVLGKLIV 9 TV+G+L+V Sbjct: 218 TVMGQLLV 225>XP_006715073 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STVLGKLIV 9 +T +GKLIV Sbjct: 458 ATHIGKLIV 466>XP_006712515 Length = 3232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712514 Length = 2496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712513 Length = 3220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712512 Length = 3237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712511 Length = 3256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712510 Length = 3305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712509 Length = 3319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_005246533 Length = 3323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006712508 Length = 3324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>XP_006710989 Length = 283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STVLGKLI 8 +TVLG+L+ Sbjct: 79 NTVLGELV 86>XP_005271283 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STVLGKLI 8 +TVLG+L+ Sbjct: 79 NTVLGELV 86>NP_115893 Length = 3258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 STVLGKL 7 +T+LGKL Sbjct: 514 TTILGKL 520>NP_689726 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TVLGKLI 8 T+LGKL+ Sbjct: 156 TLLGKLV 162Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.143 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,154 Number of extensions: 580 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |