Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 18 1135 NP_149038 17 3301 NP_060798 16 5631 XP_005263769 16 5631 XP_005263768 16 5631 NP_620135 16 7355 NP_001156807 16 7355 NP_055833 16 7355 NP_001186871 16 7355 XP_006715464 16 7355 XP_006715463 16 7355 XP_006715462 16 7355 XP_006715461 16 7355 XP_006715460 16 7355 XP_006715459 16 7355 XP_006715458 16 7355 XP_006715457 16 7355 XP_006715456 16 7355 NP_055840 15 9605 NP_001243546 15 9605 NP_006650 15 9605 NP_003957 15 9605 NP_001243275 15 9605 NP_001137429 15 9605 NP_110411 15 9605 NP_757385 15 9605 NP_115807 15 9605 NP_722576 15 9605 NP_001026872 15 9605 NP_001243277 15 9605 NP_001243276 15 9605 XP_005262424 15 9605 XP_006717659 15 9605 XP_006715633 15 9605 XP_006715632 15 9605 XP_006714571 15 9605 XP_006714570 15 9605 XP_006714569 15 9605 XP_006711931 15 9605 XP_006711930 15 9605 XP_006711929 15 9605 XP_006711928 15 9605 XP_006711927 15 9605 XP_006711926 15 9605 XP_006711925 15 9605>NP_000312 Length = 928 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STTSVNSTA 9 STT VNSTA Sbjct: 618 STTRVNSTA 626>NP_149038 Length = 512 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STTSVNSTA 9 STT+VNS A Sbjct: 108 STTNVNSLA 116>NP_060798 Length = 1494 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSVNST 8 TT+VNST Sbjct: 1105 TTAVNST 1111>XP_005263769 Length = 1727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSVNST 8 TT+VNST Sbjct: 1338 TTAVNST 1344>XP_005263768 Length = 1727 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TTSVNST 8 TT+VNST Sbjct: 1338 TTAVNST 1344>NP_620135 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTS+NS Sbjct: 384 STTSLNS 390>NP_001156807 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTS+NS Sbjct: 384 STTSLNS 390>NP_055833 Length = 2465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1404 STTSVNN 1410>NP_001186871 Length = 2476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1395 STTSVNN 1401>XP_006715464 Length = 2027 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1404 STTSVNN 1410>XP_006715463 Length = 2434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1404 STTSVNN 1410>XP_006715462 Length = 2452 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1371 STTSVNN 1377>XP_006715461 Length = 2456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1395 STTSVNN 1401>XP_006715460 Length = 2465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1404 STTSVNN 1410>XP_006715459 Length = 2475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1394 STTSVNN 1400>XP_006715458 Length = 2476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1395 STTSVNN 1401>XP_006715457 Length = 2485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1404 STTSVNN 1410>XP_006715456 Length = 2485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 STTSVNS 7 STTSVN+ Sbjct: 1404 STTSVNN 1410>NP_055840 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 412 TTSVNS 417>NP_001243546 Length = 930 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STTSVNSTA 9 STTS+N A Sbjct: 116 STTSINVPA 124>NP_006650 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STTSVNSTA 9 STTS+N A Sbjct: 116 STTSINVPA 124>NP_003957 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSVNSTA 9 TT+VNS A Sbjct: 308 TTNVNSIA 315>NP_001243275 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSVNSTA 9 TT+VNS A Sbjct: 376 TTNVNSIA 383>NP_001137429 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STTSVNSTA 9 S+ +VNSTA Sbjct: 57 SSLTVNSTA 65>NP_110411 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STTSVNSTA 9 S+ +VNSTA Sbjct: 57 SSLTVNSTA 65>NP_757385 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSVNST 8 TSVNST Sbjct: 538 TSVNST 543>NP_115807 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TSVNST 8 TSVNST Sbjct: 537 TSVNST 542>NP_722576 Length = 3080 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 1224 TTSVNS 1229>NP_001026872 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSVNSTA 9 TT+VNS A Sbjct: 376 TTNVNSIA 383>NP_001243277 Length = 1057 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSVNSTA 9 TT+VNS A Sbjct: 318 TTNVNSIA 325>NP_001243276 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSVNSTA 9 TT+VNS A Sbjct: 430 TTNVNSIA 437>XP_005262424 Length = 2875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 1019 TTSVNS 1024>XP_006717659 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STTSVNSTA 9 STTS+N A Sbjct: 116 STTSINVPA 124>XP_006715633 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STTSVNSTA 9 S+ +VNSTA Sbjct: 57 SSLTVNSTA 65>XP_006715632 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STTSVNSTA 9 S+ +VNSTA Sbjct: 57 SSLTVNSTA 65>XP_006714571 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSVNSTA 9 TT+VNS A Sbjct: 151 TTNVNSIA 158>XP_006714570 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSVNSTA 9 TT+VNS A Sbjct: 308 TTNVNSIA 315>XP_006714569 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTSVNSTA 9 TT+VNS A Sbjct: 308 TTNVNSIA 315>XP_006711931 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 412 TTSVNS 417>XP_006711930 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 412 TTSVNS 417>XP_006711929 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 412 TTSVNS 417>XP_006711928 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 412 TTSVNS 417>XP_006711927 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 412 TTSVNS 417>XP_006711926 Length = 1207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 412 TTSVNS 417>XP_006711925 Length = 1209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TTSVNS 7 TTSVNS Sbjct: 412 TTSVNS 417Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.270 0.0797 0.168 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 292,659 Number of extensions: 381 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |