Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_997239 17 3301 NP_821158 17 4312 NP_006333 16 5631 NP_006571 16 5631 NP_003289 16 5631 NP_068752 16 5631 NP_463459 16 5631 XP_006723459 16 5631 XP_006723458 16 5631 XP_005247987 16 5631 XP_006713918 16 5631 XP_005247986 16 5631 XP_006713542 16 5631 XP_006713383 16 5631 XP_005265485 16 5631 XP_005263544 16 5631 NP_003194 16 7355 NP_001188263 16 7355 NP_112181 16 7355 NP_001167571 16 7355 NP_127503 16 7355 NP_127501 16 7355 NP_065151 16 7355 NP_940972 16 7355 XP_006713333 16 7355 XP_005265389 16 7355 XP_005265388 16 7355 XP_006713332 16 7355 XP_006713331 16 7355 XP_006713330 16 7355 XP_006713329 16 7355 XP_005265387 16 7355 XP_005264578 16 7355 XP_005264577 16 7355 NP_001001921 16 7355 NP_005793 15 9605 NP_001182551 15 9605 NP_056349 15 9605 NP_001271236 15 9605 NP_001271235 15 9605 NP_071918 15 9605 XP_005254649 15 9605 XP_005254648 15 9605 XP_006719364 15 9605 XP_006719363 15 9605 XP_005270784 15 9605 XP_005270783 15 9605 XP_005270782 15 9605 NP_003954 15 9605>NP_997239 Length = 243 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 STSLVTACL 9 STS TACL Sbjct: 35 STSAKTACL 43>NP_821158 Length = 662 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSLVTACL 9 T +VTACL Sbjct: 108 TVIVTACL 115>NP_006333 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 STSL T+C Sbjct: 495 STSLPTSC 502>NP_006571 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVTACL 9 LVTACL Sbjct: 8 LVTACL 13>NP_003289 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 +TSLV AC Sbjct: 434 NTSLVRAC 441>NP_068752 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 STSL T+C Sbjct: 59 STSLSTSC 66>NP_463459 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVTACL 9 LVTACL Sbjct: 39 LVTACL 44>XP_006723459 Length = 299 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TSLVTACL 9 TSL ACL Sbjct: 283 TSLAAACL 290>XP_006723458 Length = 329 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TSLVTACL 9 TSL ACL Sbjct: 313 TSLAAACL 320>XP_005247987 Length = 482 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 STSL T+C Sbjct: 135 STSLPTSC 142>XP_006713918 Length = 830 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 STSL T+C Sbjct: 483 STSLPTSC 490>XP_005247986 Length = 842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 STSL T+C Sbjct: 495 STSLPTSC 502>XP_006713542 Length = 250 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LVTACL 9 LVTACL Sbjct: 8 LVTACL 13>XP_006713383 Length = 615 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 +TSLV AC Sbjct: 434 NTSLVRAC 441>XP_005265485 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 +TSLV AC Sbjct: 415 NTSLVRAC 422>XP_005263544 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 STSL T+C Sbjct: 59 STSLSTSC 66>NP_003194 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 +TSL+T C Sbjct: 578 TTSLITHC 585>NP_001188263 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 +TSL+T C Sbjct: 409 TTSLITHC 416>NP_112181 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TSLVTAC 8 TS+ TAC Sbjct: 441 TSITTAC 447>NP_001167571 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 304 LITACL 309>NP_127503 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 304 LITACL 309>NP_127501 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 304 LITACL 309>NP_065151 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 261 LITACL 266>NP_940972 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STSLVTACL 9 S+ LVT CL Sbjct: 14 SSLLVTCCL 22>XP_006713333 Length = 360 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 261 LITACL 266>XP_005265389 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 284 LITACL 289>XP_005265388 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 304 LITACL 309>XP_006713332 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 304 LITACL 309>XP_006713331 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 304 LITACL 309>XP_006713330 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 325 LITACL 330>XP_006713329 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 325 LITACL 330>XP_005265387 Length = 426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 L+TACL Sbjct: 327 LITACL 332>XP_005264578 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 +TSL+T C Sbjct: 586 TTSLITHC 593>XP_005264577 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STSLVTAC 8 +TSL+T C Sbjct: 586 TTSLITHC 593>NP_001001921 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STSLVTACL 9 +TSLV CL Sbjct: 154 TTSLVHVCL 162>NP_005793 Length = 1045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSLVTACL 9 TSL++ CL Sbjct: 1031 TSLMSVCL 1038>NP_001182551 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSLVTACL 9 TSL++ CL Sbjct: 966 TSLMSVCL 973>NP_056349 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 282 IVTACL 287>NP_001271236 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 981 MVTACL 986>NP_001271235 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 938 MVTACL 943>NP_071918 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 1753 MVTACL 1758>XP_005254649 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 1689 MVTACL 1694>XP_005254648 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 1776 MVTACL 1781>XP_006719364 Length = 924 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 202 IVTACL 207>XP_006719363 Length = 944 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 202 IVTACL 207>XP_005270784 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 282 IVTACL 287>XP_005270783 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 282 IVTACL 287>XP_005270782 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LVTACL 9 +VTACL Sbjct: 282 IVTACL 287>NP_003954 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SLVTACL 9 SL+T CL Sbjct: 13 SLITLCL 19Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.117 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,312 Number of extensions: 567 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |