Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 19 869 NP_001243397 19 869 XP_005269721 19 869 NP_000224 17 4312 NP_005550 17 4312 NP_001795 16 5631 NP_001002909 16 5631 XP_006721846 16 5631 XP_006721845 16 5631 XP_006721844 16 5631 NP_006259 16 7355 NP_001256 16 7355 NP_689737 16 7355 NP_001153518 16 7355 NP_001153505 16 7355 NP_065118 16 7355 NP_064710 16 7355 NP_001266278 16 7355 XP_005255493 16 7355 XP_006721128 16 7355 XP_005255492 16 7355 XP_005274206 16 7355 XP_005246402 16 7355 XP_006712393 16 7355 XP_005246401 16 7355 NP_113584 15 9605 NP_001186512 15 9605 NP_065855 15 9605 NP_775934 15 9605 NP_001803 15 9605 NP_060549 15 9605 NP_001252544 15 9605 XP_005262029 15 9605 XP_005262028 15 9605 XP_005262026 15 9605 XP_006724637 15 9605 XP_005262025 15 9605 XP_005262024 15 9605 XP_005262023 15 9605 XP_005262022 15 9605 XP_006714917 15 9605 XP_006714916 15 9605 XP_006714915 15 9605 XP_006714914 15 9605 XP_006714913 15 9605 XP_006714912 15 9605 XP_006714911 15 9605 XP_006714910 15 9605 XP_006714909 15 9605 XP_006714908 15 9605 XP_006714907 15 9605 XP_006714906 15 9605 XP_006714905 15 9605 XP_006714904 15 9605 XP_005265946 15 9605 XP_006714626 15 9605 XP_006714128 15 9605 XP_006714127 15 9605 XP_005264455 15 9605>NP_036462 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STRKVNKKT 9 ST KVNKKT Sbjct: 423 STLKVNKKT 431>NP_001243397 Length = 1890 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STRKVNKKT 9 ST KVNKKT Sbjct: 423 STLKVNKKT 431>XP_005269721 Length = 2073 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STRKVNKKT 9 ST KVNKKT Sbjct: 423 STLKVNKKT 431>NP_000224 Length = 699 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STRKVNKKT 9 + RKVN KT Sbjct: 307 TVRKVNNKT 315>NP_005550 Length = 3075 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STRKVNKKT 9 ST+KVN+ T Sbjct: 1639 STQKVNRAT 1647>NP_001795 Length = 265 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RKVNKK 8 RKVNKK Sbjct: 210 RKVNKK 215>NP_001002909 Length = 1502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRKVNKK 8 +TRK NKK Sbjct: 1153 ATRKPNKK 1160>XP_006721846 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRKVNKK 8 +TRK NKK Sbjct: 1075 ATRKPNKK 1082>XP_006721845 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRKVNKK 8 +TRK NKK Sbjct: 1075 ATRKPNKK 1082>XP_006721844 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRKVNKK 8 +TRK NKK Sbjct: 1075 ATRKPNKK 1082>NP_006259 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVNKKT 9 K+NKKT Sbjct: 281 KINKKT 286>NP_001256 Length = 313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RKVNKK 8 RK+NKK Sbjct: 242 RKINKK 247>NP_689737 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 614 KKVNRKT 620Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 714 QKVNRKT 720>NP_001153518 Length = 1261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 614 KKVNRKT 620Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 714 QKVNRKT 720>NP_001153505 Length = 1260 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 614 KKVNRKT 620Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 714 QKVNRKT 720>NP_065118 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TRK NKK Sbjct: 27 TRKKNKK 33>NP_064710 Length = 1052 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TRKVNKK 8 T+KVN+K Sbjct: 134 TKKVNRK 140>NP_001266278 Length = 250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TRK NKK Sbjct: 27 TRKKNKK 33>XP_005255493 Length = 959 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TRKVNKK 8 T+KVN+K Sbjct: 134 TKKVNRK 140>XP_006721128 Length = 985 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TRKVNKK 8 T+KVN+K Sbjct: 134 TKKVNRK 140>XP_005255492 Length = 1026 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TRKVNKK 8 T+KVN+K Sbjct: 134 TKKVNRK 140>XP_005274206 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KVNKKT 9 K+NKKT Sbjct: 295 KINKKT 300>XP_005246402 Length = 1265 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 614 KKVNRKT 620Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 714 QKVNRKT 720>XP_006712393 Length = 1267 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 620 KKVNRKT 626Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 720 QKVNRKT 726>XP_005246401 Length = 1271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 620 KKVNRKT 626Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 +KVN+KT Sbjct: 720 QKVNRKT 726>NP_113584 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3737 TRRANKK 3743>NP_001186512 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRKVNKKT 9 TR++N KT Sbjct: 172 TREMNSKT 179>NP_065855 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRKVNKKT 9 TR++N KT Sbjct: 172 TREMNSKT 179>NP_775934 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 282 TRKPKKKT 289>NP_001803 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STRKVNKKT 9 S+RK KKT Sbjct: 556 SSRKSTKKT 564>NP_060549 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STRKVNKK 8 S++KVN+K Sbjct: 406 SSKKVNEK 413>NP_001252544 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 282 TRKPKKKT 289>XP_005262029 Length = 4240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3603 TRRANKK 3609>XP_005262028 Length = 4341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3704 TRRANKK 3710>XP_005262026 Length = 4359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3737 TRRANKK 3743>XP_006724637 Length = 4365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3728 TRRANKK 3734>XP_005262025 Length = 4373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3736 TRRANKK 3742>XP_005262024 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3737 TRRANKK 3743>XP_005262023 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3737 TRRANKK 3743>XP_005262022 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TRKVNKK 8 TR+ NKK Sbjct: 3737 TRRANKK 3743>XP_006714917 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 282 TRKPKKKT 289>XP_006714916 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 282 TRKPKKKT 289>XP_006714915 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 179 TRKPKKKT 186>XP_006714914 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 306 TRKPKKKT 313>XP_006714913 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 271 TRKPKKKT 278>XP_006714912 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 282 TRKPKKKT 289>XP_006714911 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 282 TRKPKKKT 289>XP_006714910 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 283 TRKPKKKT 290>XP_006714909 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 283 TRKPKKKT 290>XP_006714908 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 283 TRKPKKKT 290>XP_006714907 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 283 TRKPKKKT 290>XP_006714906 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 283 TRKPKKKT 290>XP_006714905 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 311 TRKPKKKT 318>XP_006714904 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 325 TRKPKKKT 332>XP_005265946 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TRKVNKKT 9 TRK KKT Sbjct: 359 TRKPKKKT 366>XP_006714626 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKVNKKT 9 R+VN+KT Sbjct: 4 RRVNQKT 10>XP_006714128 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STRKVNKKT 9 S+RK KKT Sbjct: 343 SSRKSTKKT 351>XP_006714127 Length = 935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STRKVNKKT 9 S+RK KKT Sbjct: 556 SSRKSTKKT 564>XP_005264455 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 STRKVNKK 8 S++KVN+K Sbjct: 406 SSKKVNEK 413Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.104 0.246 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 425,714 Number of extensions: 881 Number of successful extensions: 65 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |