Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 299 XP_006717989 20 299 NP_055811 18 1135 XP_005247296 18 1135 XP_006713604 18 1135 XP_005247295 18 1135 NP_001124432 18 1135 NP_001265273 18 1935 NP_001094 18 1935 NP_001265272 18 1935 NP_001276324 17 2528 NP_003313 17 2528 NP_813977 17 2528 NP_003311 17 2528 XP_006718366 17 2528 XP_005253166 17 2528 NP_001003712 17 4312 NP_065892 17 4312 XP_005268680 17 4312 XP_006719287 17 4312 XP_005268679 17 4312 XP_005268678 17 4312 XP_006719286 17 4312 XP_006719285 17 4312 NP_004915 16 5631 NP_001138537 16 5631 NP_001093 16 5631 NP_001123477 16 5631 NP_001123476 16 5631 NP_006548 16 5631 NP_870987 16 5631 NP_001124337 16 5631 XP_005259339 16 5631 XP_005259338 16 5631 XP_006723469 16 5631 XP_005251411 16 5631 XP_005251409 16 5631 XP_005251408 16 5631 XP_006716780 16 5631 NP_001161710 16 7355 NP_001161709 16 7355 NP_001161708 16 7355 NP_009298 16 7355 NP_004046 16 7355 NP_005149 16 7355 NP_001161711 16 7355 XP_005245145 16 7355 NP_001129472 16 7355 NP_000375 15 9605 NP_001245300 15 9605 NP_001095 15 9605 NP_001001331 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_001243779 15 9605 NP_596869 15 9605 XP_006718528 15 9605 XP_006713243 15 9605 XP_006713242 15 9605 XP_006713239 15 9605 XP_005265236 15 9605 XP_006713238 15 9605 XP_005246888 15 9605 XP_006712788 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_000305 Length = 403 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TRDKKGVT 9 TRDKKGVT Sbjct: 160 TRDKKGVT 167>XP_006717989 Length = 388 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TRDKKGVT 9 TRDKKGVT Sbjct: 145 TRDKKGVT 152>NP_055811 Length = 1655 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 RDKKGVT 9 RDKKGVT Sbjct: 1486 RDKKGVT 1492>XP_005247296 Length = 1673 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 RDKKGVT 9 RDKKGVT Sbjct: 1504 RDKKGVT 1510>XP_006713604 Length = 1685 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 RDKKGVT 9 RDKKGVT Sbjct: 1516 RDKKGVT 1522>XP_005247295 Length = 1705 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 RDKKGVT 9 RDKKGVT Sbjct: 1536 RDKKGVT 1542>NP_001124432 Length = 1693 Score = 18.5 bits (36), Expect = 1135 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 RDKKGVT 9 RDKKGVT Sbjct: 1524 RDKKGVT 1530>NP_001265273 Length = 686 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG+T Sbjct: 536 TRDAKGIT 543>NP_001094 Length = 894 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG+T Sbjct: 744 TRDAKGIT 751>NP_001265272 Length = 894 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG+T Sbjct: 744 TRDAKGIT 751>NP_001276324 Length = 489 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRDKKGV 8 TRDKKG+ Sbjct: 257 TRDKKGM 263>NP_003313 Length = 542 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRDKKGV 8 TRDKKG+ Sbjct: 310 TRDKKGM 316>NP_813977 Length = 506 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRDKKGV 8 TRDKKG+ Sbjct: 270 TRDKKGM 276>NP_003311 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRDKKGV 8 TRDKKG+ Sbjct: 325 TRDKKGM 331>XP_006718366 Length = 451 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRDKKGV 8 TRDKKG+ Sbjct: 312 TRDKKGM 318>XP_005253166 Length = 548 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRDKKGV 8 TRDKKG+ Sbjct: 312 TRDKKGM 318>NP_001003712 Length = 847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STR KKG+ Sbjct: 776 STRRKKGI 783>NP_065892 Length = 889 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STR KKG+ Sbjct: 818 STRRKKGI 825>XP_005268680 Length = 847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STR KKG+ Sbjct: 776 STRRKKGI 783>XP_006719287 Length = 847 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STR KKG+ Sbjct: 776 STRRKKGI 783>XP_005268679 Length = 886 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STR KKG+ Sbjct: 815 STRRKKGI 822>XP_005268678 Length = 889 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STR KKG+ Sbjct: 818 STRRKKGI 825>XP_006719286 Length = 909 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STR KKG+ Sbjct: 838 STRRKKGI 845>XP_006719285 Length = 912 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STR KKG+ Sbjct: 841 STRRKKGI 848>NP_004915 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 756 TRDAKGIS 763>NP_001138537 Length = 900 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 STRD+K + Sbjct: 752 STRDRKAI 759>NP_001093 Length = 892 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 737 TRDAKGIS 744>NP_001123477 Length = 887 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 737 TRDAKGIS 744>NP_001123476 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 737 TRDAKGIS 744>NP_006548 Length = 226 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STRDKKGVT 9 +T DKKG++ Sbjct: 173 ATEDKKGLS 181>NP_870987 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STRDKKGVT 9 +T DKKG++ Sbjct: 173 ATEDKKGLS 181>NP_001124337 Length = 226 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STRDKKGVT 9 +T DKKG++ Sbjct: 173 ATEDKKGLS 181>XP_005259339 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 756 TRDAKGIS 763>XP_005259338 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 756 TRDAKGIS 763>XP_006723469 Length = 911 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 756 TRDAKGIS 763>XP_005251411 Length = 226 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STRDKKGVT 9 +T DKKG++ Sbjct: 173 ATEDKKGLS 181>XP_005251409 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STRDKKGVT 9 +T DKKG++ Sbjct: 173 ATEDKKGLS 181>XP_005251408 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STRDKKGVT 9 +T DKKG++ Sbjct: 173 ATEDKKGLS 181>XP_006716780 Length = 561 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 STRDKKGVT 9 +T DKKG++ Sbjct: 173 ATEDKKGLS 181>NP_001161710 Length = 1058 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRD+KG Sbjct: 624 TRDRKG 629>NP_001161709 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRD+KG Sbjct: 645 TRDRKG 650>NP_001161708 Length = 1161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRD+KG Sbjct: 624 TRDRKG 629>NP_009298 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRD+KG Sbjct: 645 TRDRKG 650>NP_004046 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STRDKKGVT 9 S R+K GVT Sbjct: 308 SEREKMGVT 316>NP_005149 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRD+KG Sbjct: 630 TRDRKG 635>NP_001161711 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRD+KG Sbjct: 609 TRDRKG 614>XP_005245145 Length = 1146 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRD+KG Sbjct: 609 TRDRKG 614>NP_001129472 Length = 1064 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRD+KG Sbjct: 630 TRDRKG 635>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 RDKKGVT 9 +DKKG++ Sbjct: 3992 KDKKGIS 3998>NP_001245300 Length = 944 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 794 TRDAKGLS 801>NP_001095 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TRDKKGVT 9 TRD KG++ Sbjct: 751 TRDAKGLS 758>NP_001001331 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDKKGV 8 +DKKGV Sbjct: 299 KDKKGV 304>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 21524 ATRDHRGV 21531>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 21649 ATRDHRGV 21656>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 28948 ATRDHRGV 28955>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 28021 ATRDHRGV 28028>XP_006718528 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TRDKKG 7 TRDK+G Sbjct: 146 TRDKQG 151>XP_006713243 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDKKGV 8 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713242 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDKKGV 8 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713239 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDKKGV 8 +DKKGV Sbjct: 299 KDKKGV 304>XP_005265236 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDKKGV 8 +DKKGV Sbjct: 299 KDKKGV 304>XP_006713238 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RDKKGV 8 +DKKGV Sbjct: 299 KDKKGV 304>XP_005246888 Length = 22663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 17261 ATRDHRGV 17268>XP_006712788 Length = 24022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 18620 ATRDHRGV 18627>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 28576 ATRDHRGV 28583>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 30082 ATRDHRGV 30089>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 30589 ATRDHRGV 30596>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STRDKKGV 8 +TRD +GV Sbjct: 21716 ATRDHRGV 21723Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.118 0.302 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 557,479 Number of extensions: 760 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |