Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_001027006 17 2528 NP_001184033 16 5631 NP_005924 16 5631 NP_001243665 16 5631 NP_036578 16 5631 NP_001243663 16 5631 NP_001243664 16 5631 NP_001243662 16 5631 NP_001243661 16 5631 NP_003793 16 5631 XP_006718903 16 5631 XP_006718902 16 5631 NP_006173 16 7355 NP_001014796 16 7355 NP_849144 16 7355 XP_006713662 16 7355 XP_006713661 16 7355 XP_006713660 16 7355 XP_005247434 16 7355 XP_006713659 16 7355 XP_006711408 16 7355 XP_006711407 16 7355 XP_005245278 16 7355 NP_619639 15 9605 NP_733842 15 9605 NP_001269683 15 9605 NP_001184113 15 9605 NP_000435 15 9605 NP_056049 15 9605 NP_001091988 15 9605 NP_002548 15 9605 NP_002510 15 9605 NP_061897 15 9605 XP_006724995 15 9605 XP_005248952 15 9605 XP_005248951 15 9605 XP_005248950 15 9605 XP_005248949 15 9605 XP_006712098 15 9605 XP_006712097 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STNALSFPY 9 ST ALSFPY Sbjct: 1181 STYALSFPY 1189>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STNALSFPY 9 ST ALSFPY Sbjct: 976 STYALSFPY 984>NP_001027006 Length = 1149 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TNALSFP 8 TN+LSFP Sbjct: 1096 TNSLSFP 1102>NP_001184033 Length = 3972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STNALSFPY 9 S ALSFP+ Sbjct: 2364 SKEALSFPH 2372>NP_005924 Length = 3969 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STNALSFPY 9 S ALSFP+ Sbjct: 2361 SKEALSFPH 2369>NP_001243665 Length = 298 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TNALSFPY 9 TNA S PY Sbjct: 195 TNANSIPY 202>NP_036578 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TNALSFPY 9 TNA S PY Sbjct: 225 TNANSIPY 232>NP_001243663 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TNALSFPY 9 TNA S PY Sbjct: 203 TNANSIPY 210>NP_001243664 Length = 331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TNALSFPY 9 TNA S PY Sbjct: 195 TNANSIPY 202>NP_001243662 Length = 341 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TNALSFPY 9 TNA S PY Sbjct: 205 TNANSIPY 212>NP_001243661 Length = 369 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TNALSFPY 9 TNA S PY Sbjct: 233 TNANSIPY 240>NP_003793 Length = 1938 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STNALSFPY 9 STN FP+ Sbjct: 306 STNPFDFPF 314>XP_006718903 Length = 2673 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STNALSFPY 9 S ALSFP+ Sbjct: 1065 SKEALSFPH 1073>XP_006718902 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STNALSFPY 9 S ALSFP+ Sbjct: 1356 SKEALSFPH 1364>NP_006173 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 NA+SFP Sbjct: 316 NAISFP 321>NP_001014796 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 NA+SFP Sbjct: 316 NAISFP 321>NP_849144 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STNALSFP 8 +T ALSFP Sbjct: 1075 ATAALSFP 1082>XP_006713662 Length = 1846 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STNALSFP 8 +T ALSFP Sbjct: 1147 ATAALSFP 1154>XP_006713661 Length = 1860 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STNALSFP 8 +T ALSFP Sbjct: 1147 ATAALSFP 1154>XP_006713660 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STNALSFP 8 +T ALSFP Sbjct: 1075 ATAALSFP 1082>XP_005247434 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STNALSFP 8 +T ALSFP Sbjct: 1075 ATAALSFP 1082>XP_006713659 Length = 2695 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 STNALSFP 8 +T ALSFP Sbjct: 1147 ATAALSFP 1154>XP_006711408 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 NA+SFP Sbjct: 328 NAISFP 333>XP_006711407 Length = 855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 NA+SFP Sbjct: 316 NAISFP 321>XP_005245278 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 NA+SFP Sbjct: 328 NAISFP 333>NP_619639 Length = 4074 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 STNALSFPY 9 S+N ++FP+ Sbjct: 2510 SSNLVAFPF 2518>NP_733842 Length = 3396 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 STNALSFPY 9 S+N ++FP+ Sbjct: 2510 SSNLVAFPF 2518>NP_001269683 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 STNALSFP 8 STN + FP Sbjct: 544 STNQIRFP 551>NP_001184113 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 STNALSFPY 9 S ALS PY Sbjct: 155 SAAALSIPY 163>NP_000435 Length = 749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 STNALSFP 8 STN + FP Sbjct: 544 STNQIRFP 551>NP_056049 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 N+LSFP Sbjct: 85 NSLSFP 90>NP_001091988 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 N+LSFP Sbjct: 85 NSLSFP 90>NP_002548 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NALSFPY 9 NA+SF Y Sbjct: 333 NAISFSY 339>NP_002510 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 NA+SFP Sbjct: 1091 NAVSFP 1096>NP_061897 Length = 2071 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 STNALSFPY 9 S ALS PY Sbjct: 1915 SNRALSTPY 1923>XP_006724995 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NALSFPY 9 NA+S PY Sbjct: 430 NAISSPY 436>XP_005248952 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 N+LSFP Sbjct: 85 NSLSFP 90>XP_005248951 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 N+LSFP Sbjct: 85 NSLSFP 90>XP_005248950 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 N+LSFP Sbjct: 85 NSLSFP 90>XP_005248949 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NALSFP 8 N+LSFP Sbjct: 85 NSLSFP 90>XP_006712098 Length = 2059 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 STNALSFPY 9 S ALS PY Sbjct: 1903 SNRALSTPY 1911>XP_006712097 Length = 2070 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 STNALSFPY 9 S ALS PY Sbjct: 1914 SNRALSTPY 1922Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.123 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 534,297 Number of extensions: 497 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |