Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001123914 20 509 NP_005334 20 509 NP_002515 20 509 NP_853510 20 509 NP_004976 18 1135 NP_066301 17 3301 XP_005251088 17 3301 NP_078911 17 4312 NP_001257628 17 4312 NP_001257625 17 4312 NP_001257626 17 4312 NP_001257627 17 4312 NP_001257624 17 4312 NP_060757 17 4312 NP_060427 17 4312 XP_005252701 17 4312 XP_006717604 17 4312 XP_006717603 17 4312 XP_005252185 17 4312 XP_006717294 17 4312 XP_005252184 17 4312 XP_005252183 17 4312 NP_001259004 16 5631 NP_005144 16 5631 NP_006755 16 5631 XP_006721395 16 5631 XP_006721393 16 5631 NP_849188 16 7355 NP_001265238 16 7355 NP_006413 16 7355 NP_066278 16 7355 NP_001258662 16 7355 XP_005253722 16 7355 XP_005253721 16 7355 XP_006719014 16 7355 XP_006713232 16 7355 XP_006713231 16 7355 XP_006713230 16 7355 XP_006713229 16 7355 NP_004031 15 9605 NP_060283 15 9605 NP_001138923 15 9605 NP_786886 15 9605 NP_001036143 15 9605 NP_003076 15 9605 NP_001036144 15 9605 NP_001001502 15 9605 XP_005256177 15 9605 XP_006714979 15 9605 XP_006714978 15 9605 XP_006714977 15 9605 NP_006741 15 9605>NP_001123914 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 S KTRQGVE Sbjct: 145 SAKTRQGVE 153>NP_005334 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 S KTRQGVE Sbjct: 145 SAKTRQGVE 153>NP_002515 Length = 189 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 S KTRQGVE Sbjct: 145 SAKTRQGVE 153>NP_853510 Length = 233 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 S KTRQGVE Sbjct: 181 SAKTRQGVE 189>NP_004976 Length = 188 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 S KTRQGV+ Sbjct: 145 SAKTRQGVD 153>NP_066301 Length = 538 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTRQGVE 9 T TRQG+E Sbjct: 402 TGTRQGIE 409>XP_005251088 Length = 636 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TKTRQGVE 9 T TRQG+E Sbjct: 500 TGTRQGIE 507>NP_078911 Length = 725 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 ST++RQG E Sbjct: 210 STRSRQGEE 218>NP_001257628 Length = 794 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 494 KTRQGTE 500>NP_001257625 Length = 816 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 516 KTRQGTE 522>NP_001257626 Length = 799 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 499 KTRQGTE 505>NP_001257627 Length = 769 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 469 KTRQGTE 475>NP_001257624 Length = 841 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 541 KTRQGTE 547>NP_060757 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 546 KTRQGTE 552>NP_060427 Length = 632 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 STKTRQGVE 9 ST+T++G+E Sbjct: 431 STETKEGLE 439>XP_005252701 Length = 794 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 494 KTRQGTE 500>XP_006717604 Length = 820 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 546 KTRQGTE 552>XP_006717603 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTRQG E Sbjct: 546 KTRQGTE 552>XP_005252185 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 ST++RQG E Sbjct: 54 STRSRQGEE 62>XP_006717294 Length = 692 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 ST++RQG E Sbjct: 210 STRSRQGEE 218>XP_005252184 Length = 725 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 ST++RQG E Sbjct: 210 STRSRQGEE 218>XP_005252183 Length = 725 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 ST++RQG E Sbjct: 210 STRSRQGEE 218>NP_001259004 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 +TKT+Q VE Sbjct: 664 TTKTKQEVE 672>NP_005144 Length = 798 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 +TKT+Q VE Sbjct: 660 TTKTKQEVE 668>NP_006755 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 STKTRQG 7 S KTRQG Sbjct: 152 SAKTRQG 158>XP_006721395 Length = 602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 +TKT+Q VE Sbjct: 464 TTKTKQEVE 472>XP_006721393 Length = 781 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 STKTRQGVE 9 +TKT+Q VE Sbjct: 665 TTKTKQEVE 673>NP_849188 Length = 2400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STKTRQGVE 9 ST+T QG E Sbjct: 1719 STRTVQGAE 1727>NP_001265238 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 STKTRQG 7 STK RQG Sbjct: 223 STKERQG 229>NP_006413 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 STKTRQG 7 STK RQG Sbjct: 223 STKERQG 229>NP_066278 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKTRQGVE 9 +KTR+GV+ Sbjct: 397 SKTRKGVQ 404>NP_001258662 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKTRQGVE 9 +KTR+GV+ Sbjct: 367 SKTRKGVQ 374>XP_005253722 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 STKTRQG 7 STK RQG Sbjct: 223 STKERQG 229>XP_005253721 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 STKTRQG 7 STK RQG Sbjct: 223 STKERQG 229>XP_006719014 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 STKTRQG 7 STK RQG Sbjct: 223 STKERQG 229>XP_006713232 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKTRQGVE 9 +KTR+GV+ Sbjct: 397 SKTRKGVQ 404>XP_006713231 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKTRQGVE 9 +KTR+GV+ Sbjct: 297 SKTRKGVQ 304>XP_006713230 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKTRQGVE 9 +KTR+GV+ Sbjct: 397 SKTRKGVQ 404>XP_006713229 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKTRQGVE 9 +KTR+GV+ Sbjct: 352 SKTRKGVQ 359>NP_004031 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STKTRQGV 8 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_060283 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KTRQGVE 9 KTR+G E Sbjct: 97 KTREGAE 103>NP_001138923 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TKTRQG 7 TKT+QG Sbjct: 4 TKTKQG 9>NP_786886 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STKTRQGV 8 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_001036143 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STKTRQGV 8 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_003076 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKTRQGV 8 +KTR+GV Sbjct: 42 SKTREGV 48>NP_001036144 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 STKTRQGV 8 S KT++GV Sbjct: 160 SAKTKEGV 167>NP_001001502 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKTRQGV 8 +KTR+GV Sbjct: 42 SKTREGV 48>XP_005256177 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKTRQGVE 9 T +RQG+E Sbjct: 239 TGSRQGIE 246>XP_006714979 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKTRQGV 8 +KTR+GV Sbjct: 42 SKTREGV 48>XP_006714978 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKTRQGV 8 +KTR+GV Sbjct: 42 SKTREGV 48>XP_006714977 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TKTRQGV 8 +KTR+GV Sbjct: 42 SKTREGV 48>NP_006741 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKTRQGVE 9 T +RQG+E Sbjct: 406 TGSRQGIE 413Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.110 0.268 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 463,441 Number of extensions: 688 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |