Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001273052 17 2528 NP_001273054 17 2528 NP_005826 17 2528 XP_006715015 17 2528 XP_006715014 17 2528 XP_006715013 17 2528 XP_006715012 17 2528 XP_005248841 17 2528 NP_115518 17 4312 XP_006722394 17 4312 XP_005258167 17 4312 XP_006722393 17 4312 XP_006722392 17 4312 XP_006722391 17 4312 XP_006722390 17 4312 XP_005258166 17 4312 XP_006722389 17 4312 XP_005258165 17 4312 XP_005258164 17 4312 NP_060395 16 5631 XP_006716870 16 5631 XP_006716869 16 5631 XP_006716868 16 5631 XP_006716867 16 5631 NP_055463 16 7355 XP_005247976 16 7355 XP_005247975 16 7355 XP_005247974 16 7355 XP_005247973 16 7355 XP_005247972 16 7355 XP_005247971 16 7355 XP_006711599 16 7355 XP_005245543 16 7355 XP_006711598 16 7355 XP_006711597 16 7355 XP_006711596 16 7355 XP_006711595 16 7355 XP_006711594 16 7355 NP_110391 16 7355 NP_001243040 15 9605 NP_001243035 15 9605 NP_004249 15 9605 NP_001243038 15 9605 NP_001254505 15 9605 NP_694942 15 9605>NP_001273052 Length = 478 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKAAVFSW 9 TKA+V+ W Sbjct: 79 TKASVYQW 86>NP_001273054 Length = 398 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKAAVFSW 9 TKA+V+ W Sbjct: 79 TKASVYQW 86>NP_005826 Length = 436 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKAAVFSW 9 TKA+V+ W Sbjct: 79 TKASVYQW 86>XP_006715015 Length = 356 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKAAVFSW 9 TKA+V+ W Sbjct: 79 TKASVYQW 86>XP_006715014 Length = 398 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKAAVFSW 9 TKA+V+ W Sbjct: 79 TKASVYQW 86>XP_006715013 Length = 455 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKAAVFSW 9 TKA+V+ W Sbjct: 56 TKASVYQW 63>XP_006715012 Length = 478 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKAAVFSW 9 TKA+V+ W Sbjct: 79 TKASVYQW 86>XP_005248841 Length = 478 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKAAVFSW 9 TKA+V+ W Sbjct: 79 TKASVYQW 86>NP_115518 Length = 2537 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 2200 STKQSMFPW 2208>XP_006722394 Length = 1845 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 1507 STKQSMFPW 1515>XP_005258167 Length = 1856 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 1518 STKQSMFPW 1526>XP_006722393 Length = 2199 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 1861 STKQSMFPW 1869>XP_006722392 Length = 2444 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 2106 STKQSMFPW 2114>XP_006722391 Length = 2448 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 2110 STKQSMFPW 2118>XP_006722390 Length = 2467 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 2130 STKQSMFPW 2138>XP_005258166 Length = 2468 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 2130 STKQSMFPW 2138>XP_006722389 Length = 2506 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 2200 STKQSMFPW 2208>XP_005258165 Length = 2534 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 2196 STKQSMFPW 2204>XP_005258164 Length = 2538 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK ++F W Sbjct: 2200 STKQSMFPW 2208>NP_060395 Length = 1909 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 ST++ +F W Sbjct: 873 STRSGIFLW 881>XP_006716870 Length = 1456 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 ST++ +F W Sbjct: 371 STRSGIFLW 379>XP_006716869 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 ST++ +F W Sbjct: 637 STRSGIFLW 645>XP_006716868 Length = 1894 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 ST++ +F W Sbjct: 873 STRSGIFLW 881>XP_006716867 Length = 1958 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 ST++ +F W Sbjct: 873 STRSGIFLW 881>NP_055463 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KAAVFSW 9 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247976 Length = 1002 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KAAVFSW 9 KAAV SW Sbjct: 700 KAAVDSW 706>XP_005247975 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KAAVFSW 9 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247974 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KAAVFSW 9 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247973 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KAAVFSW 9 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247972 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KAAVFSW 9 KAAV SW Sbjct: 906 KAAVDSW 912>XP_005247971 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KAAVFSW 9 KAAV SW Sbjct: 906 KAAVDSW 912>XP_006711599 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STKAAVFSW 9 STK +F W Sbjct: 83 STKGQLFLW 91>XP_005245543 Length = 202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STKAAVFSW 9 STK +F W Sbjct: 83 STKGQLFLW 91>XP_006711598 Length = 313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STKAAVFSW 9 STK +F W Sbjct: 83 STKGQLFLW 91>XP_006711597 Length = 319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STKAAVFSW 9 STK +F W Sbjct: 83 STKGQLFLW 91>XP_006711596 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STKAAVFSW 9 STK +F W Sbjct: 83 STKGQLFLW 91>XP_006711595 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STKAAVFSW 9 STK +F W Sbjct: 83 STKGQLFLW 91>XP_006711594 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STKAAVFSW 9 STK +F W Sbjct: 83 STKGQLFLW 91>NP_110391 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 STKAAVFSW 9 STK +F W Sbjct: 83 STKGQLFLW 91>NP_001243040 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK A FS+ Sbjct: 74 STKDAAFSY 82>NP_001243035 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK A FS+ Sbjct: 74 STKDAAFSY 82>NP_004249 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK A FS+ Sbjct: 74 STKDAAFSY 82>NP_001243038 Length = 1021 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 STK A FS+ Sbjct: 74 STKDAAFSY 82>NP_001254505 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 ST+ ++ SW Sbjct: 739 STRGSLLSW 747>NP_694942 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 STKAAVFSW 9 ST+ ++ SW Sbjct: 744 STRGSLLSW 752Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.112 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 342,424 Number of extensions: 392 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |