Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 21 175 NP_001257437 21 175 NP_006281 21 175 XP_006715618 21 175 XP_005267176 21 175 NP_003817 17 3301 NP_001451 17 4312 NP_775832 17 4312 XP_005245096 17 4312 NP_001072996 16 5631 NP_001162 16 5631 NP_001058 16 5631 NP_001136157 16 5631 NP_055530 16 5631 NP_938015 16 5631 NP_055509 16 5631 NP_001138792 16 5631 NP_060009 16 5631 NP_001059 16 5631 XP_005255367 16 5631 XP_006725257 16 5631 XP_006725256 16 5631 XP_005257689 16 5631 XP_006721125 16 5631 XP_006719124 16 5631 XP_005253405 16 5631 XP_005271793 16 5631 XP_005272296 16 5631 XP_006717400 16 5631 XP_005272295 16 5631 XP_006717399 16 5631 XP_005272294 16 5631 XP_005265484 16 5631 XP_005264213 16 5631 NP_787054 16 5631 NP_777601 16 5631 NP_065761 16 7355 NP_003301 16 7355 XP_005247497 15 9605 NP_001078889 15 9605>NP_001257436 Length = 790 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STCFKRTAA 9 STCFKRT A Sbjct: 537 STCFKRTTA 545>NP_001257437 Length = 790 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STCFKRTAA 9 STCFKRT A Sbjct: 537 STCFKRTTA 545>NP_006281 Length = 790 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STCFKRTAA 9 STCFKRT A Sbjct: 537 STCFKRTTA 545>XP_006715618 Length = 577 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STCFKRTAA 9 STCFKRT A Sbjct: 324 STCFKRTTA 332>XP_005267176 Length = 790 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 STCFKRTAA 9 STCFKRT A Sbjct: 537 STCFKRTTA 545>NP_003817 Length = 312 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TCFKRTAA 9 TC+K+T A Sbjct: 192 TCYKKTIA 199>NP_001451 Length = 471 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TCFKRT 7 TCF+RT Sbjct: 29 TCFERT 34>NP_775832 Length = 518 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 STCFKRTAA 9 S CF+R AA Sbjct: 343 SFCFRRKAA 351>XP_005245096 Length = 416 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TCFKRT 7 TCF+RT Sbjct: 29 TCFERT 34>NP_001072996 Length = 99 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STCFKRTA 8 S CF RTA Sbjct: 28 SLCFLRTA 35>NP_001162 Length = 1503 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STCFKRTA 8 S CF RTA Sbjct: 28 SLCFLRTA 35>NP_001058 Length = 1531 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 TCFKR 6 TCFKR Sbjct: 732 TCFKR 736>NP_001136157 Length = 2087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 STCFKRTAA 9 S CF TAA Sbjct: 537 SACFSGTAA 545>NP_055530 Length = 1738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 STCFKRTAA 9 S CF TAA Sbjct: 188 SACFSGTAA 196>NP_938015 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 TCFKR 6 TCFKR Sbjct: 54 TCFKR 58>NP_055509 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 STCFKR 6 STCF+R Sbjct: 847 STCFER 852>NP_001138792 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 STCFKR 6 STCF+R Sbjct: 847 STCFER 852>NP_060009 Length = 4116 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 STCFKRT 7 S CFK+T Sbjct: 2333 SNCFKQT 2339>NP_001059 Length = 1621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 TCFKR 6 TCFKR Sbjct: 748 TCFKR 752>XP_005255367 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STCFKRTA 8 S CF RTA Sbjct: 129 SLCFLRTA 136>XP_006725257 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STCFKRTA 8 S CF RTA Sbjct: 129 SLCFLRTA 136>XP_006725256 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 STCFKRTA 8 S CF RTA Sbjct: 129 SLCFLRTA 136>XP_005257689 Length = 1519 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 TCFKR 6 TCFKR Sbjct: 720 TCFKR 724>XP_006721125 Length = 4070 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 STCFKRT 7 S CFK+T Sbjct: 2287 SNCFKQT 2293>XP_006719124 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TCFKRTAA 9 TCF+R+ A Sbjct: 467 TCFRRSDA 474>XP_005253405 Length = 1463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TCFKRTAA 9 TCF+R+ A Sbjct: 467 TCFRRSDA 474>XP_005271793 Length = 2061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 STCFKRTAA 9 S CF TAA Sbjct: 511 SACFSGTAA 519>XP_005272296 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 STCFKR 6 STCF+R Sbjct: 847 STCFER 852>XP_006717400 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 STCFKR 6 STCF+R Sbjct: 847 STCFER 852>XP_005272295 Length = 961 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 STCFKR 6 STCF+R Sbjct: 857 STCFER 862>XP_006717399 Length = 1002 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 STCFKR 6 STCF+R Sbjct: 956 STCFER 961>XP_005272294 Length = 1060 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 STCFKR 6 STCF+R Sbjct: 956 STCFER 961>XP_005265484 Length = 1626 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 TCFKR 6 TCFKR Sbjct: 753 TCFKR 757>XP_005264213 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 TCFKR 6 TCFKR Sbjct: 54 TCFKR 58>NP_787054 Length = 163 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 TCFKRTA 8 TC++RT+ Sbjct: 69 TCYRRTS 75>NP_777601 Length = 1453 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TCFKRTAA 9 TCF+R+ A Sbjct: 457 TCFRRSDA 464>NP_065761 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 CFKRTAA 9 C KRTAA Sbjct: 367 CEKRTAA 373>NP_003301 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 STCFKRTA 8 +TC+ RT+ Sbjct: 81 TTCYNRTS 88>XP_005247497 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 STCFKRT 7 S CF RT Sbjct: 93 SICFNRT 99>NP_001078889 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 STCFKRT 7 S CF RT Sbjct: 105 SICFNRT 111Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.118 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 556,184 Number of extensions: 611 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |