Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 299 NP_001185763 20 299 NP_055459 20 299 XP_006726410 20 299 XP_006711719 20 299 XP_006711718 20 299 XP_006711717 20 299 XP_006711716 20 299 XP_006711715 20 299 XP_006711714 20 299 XP_006711713 20 299 XP_006711712 20 299 XP_006711711 20 299 XP_006711710 20 299 XP_006711709 20 299 XP_005277503 20 299 XP_005273038 20 299 XP_006711708 20 299 XP_005277500 20 299 XP_006711707 20 299 XP_005277499 20 299 XP_006711706 20 299 XP_006711705 20 299 XP_006711164 20 299 XP_006710140 20 299 NP_612154 17 3301 NP_060876 17 3301 NP_004523 17 3301 NP_001103408 16 5631 NP_001154848 16 5631 NP_659466 16 5631 NP_001032 16 5631 NP_005425 16 5631 NP_008827 16 5631 NP_005263 16 7355 NP_006517 16 7355 NP_061825 16 7355 NP_057349 16 7355 NP_008887 16 7355 NP_002138 16 7355 NP_061975 16 7355 NP_006487 16 7355 XP_005260602 16 7355 XP_006723938 16 7355 XP_005257343 16 7355 XP_005257340 16 7355 XP_006721919 16 7355 XP_005257341 16 7355 NP_076921 16 7355 NP_821074 15 9605 NP_000923 15 9605 NP_060312 15 9605 NP_112184 15 9605 NP_001171817 15 9605 NP_001008892 15 9605 NP_001008894 15 9605 NP_001008860 15 9605 NP_001171818 15 9605 NP_001269961 15 9605 NP_997213 15 9605 NP_057190 15 9605 NP_878255 15 9605 NP_001244305 15 9605 XP_005260717 15 9605 XP_006720431 15 9605 XP_006720430 15 9605 XP_006720429 15 9605 XP_005272610 15 9605 XP_005272609 15 9605 XP_006720428 15 9605 XP_005272606 15 9605 XP_005272605 15 9605 XP_005272607 15 9605 XP_006720427 15 9605 XP_005272604 15 9605 XP_005272603 15 9605 XP_005267526 15 9605 XP_005269073 15 9605 XP_005274109 15 9605 NP_001171812 15 9605 NP_542789 15 9605>NP_001185761 Length = 2240 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1671 SSYYLNSAQ 1679>NP_001185763 Length = 2362 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1777 SSYYLNSAQ 1785>NP_055459 Length = 2346 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1777 SSYYLNSAQ 1785>XP_006726410 Length = 2087 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1518 SSYYLNSAQ 1526>XP_006711719 Length = 2302 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1733 SSYYLNSAQ 1741>XP_006711718 Length = 1436 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 784 SSYYLNSAQ 792>XP_006711717 Length = 2385 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1733 SSYYLNSAQ 1741>XP_006711716 Length = 2411 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1842 SSYYLNSAQ 1850>XP_006711715 Length = 2428 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1776 SSYYLNSAQ 1784>XP_006711714 Length = 2429 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1777 SSYYLNSAQ 1785>XP_006711713 Length = 2432 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1780 SSYYLNSAQ 1788>XP_006711712 Length = 2473 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1940 SSYYLNSAQ 1948>XP_006711711 Length = 2482 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1830 SSYYLNSAQ 1838>XP_006711710 Length = 2494 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1842 SSYYLNSAQ 1850>XP_006711709 Length = 2495 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1843 SSYYLNSAQ 1851>XP_005277503 Length = 2498 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1940 SSYYLNSAQ 1948>XP_005273038 Length = 2509 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1940 SSYYLNSAQ 1948>XP_006711708 Length = 2512 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1940 SSYYLNSAQ 1948>XP_005277500 Length = 2525 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1940 SSYYLNSAQ 1948>XP_006711707 Length = 2553 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1940 SSYYLNSAQ 1948>XP_005277499 Length = 2561 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1940 SSYYLNSAQ 1948>XP_006711706 Length = 2591 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1939 SSYYLNSAQ 1947>XP_006711705 Length = 2592 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1940 SSYYLNSAQ 1948>XP_006711164 Length = 2087 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 1518 SSYYLNSAQ 1526>XP_006710140 Length = 290 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSYYLNSAR 9 SSYYLNSA+ Sbjct: 30 SSYYLNSAQ 38>NP_612154 Length = 1125 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SYYLNSA 8 SY+LNSA Sbjct: 1115 SYFLNSA 1121>NP_060876 Length = 5412 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SYYLNSA 8 SY+LNSA Sbjct: 5402 SYFLNSA 5408>NP_004523 Length = 1176 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SYYLNSA 8 SY+LNSA Sbjct: 1166 SYFLNSA 1172>NP_001103408 Length = 315 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SSYYLNSA 8 S++YLNS+ Sbjct: 261 STFYLNSS 268>NP_001154848 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SSYYLNSA 8 S++YLNS+ Sbjct: 442 STFYLNSS 449>NP_659466 Length = 181 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SSYYLNSA 8 S++YLNS+ Sbjct: 127 STFYLNSS 134>NP_001032 Length = 1827 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSYYLNSAR 9 +SY +NSAR Sbjct: 981 NSYSVNSAR 989>NP_005425 Length = 153 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YYLNSA 8 YY+NSA Sbjct: 126 YYINSA 131>NP_008827 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSYY+N+ Sbjct: 3 SSYYVNA 9>NP_005263 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 +SYYLN Sbjct: 152 ASYYLN 157>NP_006517 Length = 1048 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 S+YYLN Sbjct: 482 SNYYLN 487>NP_061825 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSY++NS Sbjct: 2 SSYFVNS 8>NP_057349 Length = 697 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SYYLNSA 8 ++YLNSA Sbjct: 473 TFYLNSA 479>NP_008887 Length = 659 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SYYLNSA 8 ++YLNSA Sbjct: 435 TFYLNSA 441>NP_002138 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSY++NS Sbjct: 2 SSYFVNS 8>NP_061975 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSY++NS Sbjct: 2 SSYFVNS 8>NP_006487 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 +SYYLN Sbjct: 152 ASYYLN 157>XP_005260602 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 S+YYLN Sbjct: 482 SNYYLN 487>XP_006723938 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 S+YYLN Sbjct: 482 SNYYLN 487>XP_005257343 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSY++NS Sbjct: 2 SSYFVNS 8>XP_005257340 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSY++NS Sbjct: 2 SSYFVNS 8>XP_006721919 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSY++NS Sbjct: 2 SSYFVNS 8>XP_005257341 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSY++NS Sbjct: 2 SSYFVNS 8>NP_076921 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 SSY++NS Sbjct: 2 SSYFVNS 8>NP_821074 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 YYLNS 7 YYLNS Sbjct: 14 YYLNS 18>NP_000923 Length = 1234 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSYYLNSA 8 S+Y++NS+ Sbjct: 324 SAYFINSS 331>NP_060312 Length = 146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 +SYYL+S Sbjct: 107 TSYYLSS 113>NP_112184 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>NP_001171817 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 81 SSYFLN 86>NP_001008892 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>NP_001008894 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 81 SSYFLN 86>NP_001008860 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>NP_001171818 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>NP_001269961 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 SYYLN 6 SYYLN Sbjct: 54 SYYLN 58>NP_997213 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 158 SSYFLN 163>NP_057190 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 SYYLN 6 SYYLN Sbjct: 113 SYYLN 117>NP_878255 Length = 575 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 SYYLN 6 SYYLN Sbjct: 46 SYYLN 50>NP_001244305 Length = 550 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 SYYLN 6 SYYLN Sbjct: 21 SYYLN 25>XP_005260717 Length = 931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 YYLNS 7 YYLNS Sbjct: 798 YYLNS 802>XP_006720431 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 14 SSYFLN 19>XP_006720430 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 81 SSYFLN 86>XP_006720429 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_005272610 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_005272609 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_006720428 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_005272606 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_005272605 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_005272607 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_006720427 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_005272604 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_005272603 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SSYYLN 6 SSY+LN Sbjct: 100 SSYFLN 105>XP_005267526 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 SYYLN 6 SYYLN Sbjct: 88 SYYLN 92>XP_005269073 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSYYLNS 7 +SYYL+S Sbjct: 134 TSYYLSS 140>XP_005274109 Length = 1234 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSYYLNSA 8 S+Y++NS+ Sbjct: 324 SAYFINSS 331>NP_001171812 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSYYLNSA 8 S+Y++NS+ Sbjct: 257 SAYFINSS 264>NP_542789 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 3 YYLNS 7 YYLNS Sbjct: 773 YYLNS 777Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.115 0.301 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,545 Number of extensions: 713 Number of successful extensions: 81 Number of sequences better than 10000.0: 81 Number of HSP's gapped: 81 Number of HSP's successfully gapped: 81 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |