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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004110                                                              19     665
NP_055861                                                              16    7355
NP_060626                                                              16    7355
NP_056193                                                              16    7355
NP_001122311                                                           16    7355
XP_005272230                                                           16    7355
XP_005272229                                                           16    7355
XP_005272228                                                           16    7355
XP_006715529                                                           16    7355
NP_054880                                                              16    7355
NP_055898                                                              15    9605
NP_057591                                                              15    9605
NP_001129737                                                           15    9605
NP_001009921                                                           15    9605
XP_005257515                                                           15    9605
XP_005257513                                                           15    9605
XP_005265867                                                           15    9605
XP_005265868                                                           15    9605
XP_005265869                                                           15    9605
XP_005265866                                                           15    9605
XP_005265865                                                           15    9605
XP_005265864                                                           15    9605
XP_005247310                                                           15    9605
XP_005247308                                                           15    9605
NP_001124336                                                           15    9605
NP_056118                                                              15    9605

>NP_004110
          Length = 993

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SSVARKDTG 9
           SSVAR DTG
Sbjct: 318 SSVARNDTG 326



>NP_055861
          Length = 2677

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           S  +RKDTG
Sbjct: 822 SFYSRKDTG 830



>NP_060626
          Length = 4363

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SSVARKDTG 9
            SSV RK+ G
Sbjct: 1584 SSVERKENG 1592



>NP_056193
          Length = 4388

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SSVARKDTG 9
            SSV RK+ G
Sbjct: 1584 SSVERKENG 1592



>NP_001122311
          Length = 2137

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    SSVARKDTG 9
            SSV R D+G
Sbjct: 1784 SSVKRSDSG 1792



>XP_005272230
          Length = 2706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           S  +RKDTG
Sbjct: 822 SFYSRKDTG 830



>XP_005272229
          Length = 2706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           S  +RKDTG
Sbjct: 822 SFYSRKDTG 830



>XP_005272228
          Length = 2706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           S  +RKDTG
Sbjct: 822 SFYSRKDTG 830



>XP_006715529
          Length = 129

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  SVARKDTG 9
          SVARK+ G
Sbjct: 60 SVARKERG 67



>NP_054880
          Length = 180

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  SVARKDTG 9
          SVARK+ G
Sbjct: 60 SVARKERG 67



>NP_055898
          Length = 1481

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSV  KD+G
Sbjct: 433 SSVEAKDSG 441



>NP_057591
          Length = 1490

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSV  KD+G
Sbjct: 433 SSVEAKDSG 441



>NP_001129737
          Length = 517

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSVA  D+G
Sbjct: 489 SSVASSDSG 497



>NP_001009921
          Length = 1428

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSVA  D+G
Sbjct: 103 SSVASSDSG 111



>XP_005257515
          Length = 1256

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSV  KD+G
Sbjct: 433 SSVEAKDSG 441



>XP_005257513
          Length = 1489

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSV  KD+G
Sbjct: 432 SSVEAKDSG 440



>XP_005265867
          Length = 538

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SVARKDTG 9
           +V+RKD G
Sbjct: 460 TVSRKDNG 467



>XP_005265868
          Length = 538

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SVARKDTG 9
           +V+RKD G
Sbjct: 460 TVSRKDNG 467



>XP_005265869
          Length = 538

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SVARKDTG 9
           +V+RKD G
Sbjct: 460 TVSRKDNG 467



>XP_005265866
          Length = 538

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SVARKDTG 9
           +V+RKD G
Sbjct: 460 TVSRKDNG 467



>XP_005265865
          Length = 538

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SVARKDTG 9
           +V+RKD G
Sbjct: 460 TVSRKDNG 467



>XP_005265864
          Length = 538

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SVARKDTG 9
           +V+RKD G
Sbjct: 460 TVSRKDNG 467



>XP_005247310
          Length = 1035

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSVA  D+G
Sbjct: 103 SSVASSDSG 111



>XP_005247308
          Length = 1428

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSVA  D+G
Sbjct: 103 SSVASSDSG 111



>NP_001124336
          Length = 755

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SVARKDTG 9
           +V+RKD G
Sbjct: 677 TVSRKDNG 684



>NP_056118
          Length = 1426

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   SSVARKDTG 9
           SSVA  D+G
Sbjct: 103 SSVASSDSG 111



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.297    0.112    0.277 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 489,391
Number of extensions: 699
Number of successful extensions: 26
Number of sequences better than 10000.0: 26
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 26
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.2 bits)
S2: 28 (15.4 bits)