Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 19 665 NP_001243397 19 665 XP_005269721 19 665 NP_001166028 17 4312 NP_005886 17 4312 NP_001575 17 4312 XP_005266224 17 4312 XP_006719803 17 4312 XP_005266222 17 4312 XP_005266221 17 4312 XP_006719802 17 4312 XP_006719801 17 4312 XP_006719800 17 4312 XP_006719799 17 4312 XP_005266219 17 4312 XP_005253170 17 4312 XP_006718367 17 4312 XP_005253169 17 4312 XP_005253168 17 4312 XP_005253167 17 4312 NP_112196 16 5631 NP_001189352 16 5631 NP_001186072 16 7355 NP_001035194 16 7355 NP_073577 15 9605 NP_001106710 15 9605 NP_001138498 15 9605 NP_056078 15 9605 NP_689845 15 9605 NP_001167587 15 9605 NP_001167588 15 9605 NP_006353 15 9605 XP_005254315 15 9605 XP_005254314 15 9605 XP_006720509 15 9605 XP_005254313 15 9605 XP_005254312 15 9605 XP_006718483 15 9605 XP_006718482 15 9605 XP_006718481 15 9605 XP_006715999 15 9605 XP_006715998 15 9605 XP_006715997 15 9605 NP_542938 15 9605 NP_004383 15 9605 NP_542937 15 9605>NP_036462 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTYISAST 9 +STYISAST Sbjct: 416 TSTYISAST 424>NP_001243397 Length = 1890 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTYISAST 9 +STYISAST Sbjct: 416 TSTYISAST 424>XP_005269721 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTYISAST 9 +STYISAST Sbjct: 416 TSTYISAST 424>NP_001166028 Length = 1134 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 317 SSSYSSAST 325>NP_005886 Length = 1498 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 317 SSSYSSAST 325>NP_001575 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STYISAST 9 +TYI+AST Sbjct: 265 TTYINAST 272>XP_005266224 Length = 1307 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 126 SSSYSSAST 134>XP_006719803 Length = 1407 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 226 SSSYSSAST 234>XP_005266222 Length = 1458 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 277 SSSYSSAST 285>XP_005266221 Length = 1458 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 277 SSSYSSAST 285>XP_006719802 Length = 1458 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 277 SSSYSSAST 285>XP_006719801 Length = 1498 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 317 SSSYSSAST 325>XP_006719800 Length = 1498 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 317 SSSYSSAST 325>XP_006719799 Length = 1498 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 317 SSSYSSAST 325>XP_005266219 Length = 1498 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SS+Y SAST Sbjct: 317 SSSYSSAST 325>XP_005253170 Length = 196 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STYISAST 9 +TYI+AST Sbjct: 167 TTYINAST 174>XP_006718367 Length = 220 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STYISAST 9 +TYI+AST Sbjct: 191 TTYINAST 198>XP_005253169 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STYISAST 9 +TYI+AST Sbjct: 265 TTYINAST 272>XP_005253168 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STYISAST 9 +TYI+AST Sbjct: 265 TTYINAST 272>XP_005253167 Length = 294 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STYISAST 9 +TYI+AST Sbjct: 265 TTYINAST 272>NP_112196 Length = 733 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STYISAST 9 S+YI+AST Sbjct: 214 SSYIAAST 221>NP_001189352 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 STYISAST 9 S+YI+AST Sbjct: 58 SSYIAAST 65>NP_001186072 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSTYISAS 8 SSTYIS + Sbjct: 216 SSTYISTA 223>NP_001035194 Length = 4493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SSTYISAS 8 SSTY+++S Sbjct: 3584 SSTYVTSS 3591>NP_073577 Length = 1198 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TYISAS 8 TYISAS Sbjct: 1171 TYISAS 1176>NP_001106710 Length = 1171 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TYISAS 8 TYISAS Sbjct: 1144 TYISAS 1149>NP_001138498 Length = 2299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STYISAST 9 S Y++AST Sbjct: 920 SAYVTAST 927>NP_056078 Length = 3036 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 1765 SSTYIS 1770>NP_689845 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 806 SSTYIS 811>NP_001167587 Length = 3037 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 1765 SSTYIS 1770>NP_001167588 Length = 2400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 1129 SSTYIS 1134>NP_006353 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 STYISA 7 STYISA Sbjct: 335 STYISA 340>XP_005254315 Length = 2576 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 1765 SSTYIS 1770>XP_005254314 Length = 2605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 1765 SSTYIS 1770>XP_006720509 Length = 2646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 1765 SSTYIS 1770>XP_005254313 Length = 3057 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 1765 SSTYIS 1770>XP_005254312 Length = 3058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSTYIS 6 SSTYIS Sbjct: 1765 SSTYIS 1770>XP_006718483 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 STYISA 7 STYISA Sbjct: 335 STYISA 340>XP_006718482 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 STYISA 7 STYISA Sbjct: 335 STYISA 340>XP_006718481 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 STYISA 7 STYISA Sbjct: 335 STYISA 340>XP_006715999 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TYISAS 8 TYISAS Sbjct: 1143 TYISAS 1148>XP_006715998 Length = 1191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TYISAS 8 TYISAS Sbjct: 1164 TYISAS 1169>XP_006715997 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TYISAS 8 TYISAS Sbjct: 1170 TYISAS 1175>NP_542938 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SST I+AST Sbjct: 132 SSTPINAST 140>NP_004383 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SST I+AST Sbjct: 132 SSTPINAST 140>NP_542937 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTYISAST 9 SST I+AST Sbjct: 132 SSTPINAST 140Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.284 0.0911 0.201 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 304,544 Number of extensions: 280 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |