Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 19 869 NP_001120972 19 869 XP_006716054 19 869 XP_006716053 19 869 XP_006716052 19 869 XP_006716051 19 869 NP_073594 16 5631 XP_006713796 16 5631 XP_006713795 16 5631 XP_005247771 16 5631 XP_005247770 16 5631 XP_005247769 16 5631 XP_005247768 16 5631 XP_006713794 16 5631 XP_005247767 16 5631 NP_079052 16 7355 NP_001263347 16 7355 NP_055681 16 7355 NP_570843 16 7355 NP_001128529 16 7355 NP_116321 16 7355 XP_005258102 16 7355 XP_005254732 16 7355 XP_005254731 16 7355 XP_006720754 16 7355 XP_005254729 16 7355 XP_005254730 16 7355 XP_005254728 16 7355 XP_005254727 16 7355 XP_005266194 16 7355 XP_005266191 16 7355 XP_005266190 16 7355 XP_005266189 16 7355 NP_005091 15 9605 NP_653080 15 9605 NP_060959 15 9605 XP_005267292 15 9605 XP_005267291 15 9605 XP_005267290 15 9605 XP_005264475 15 9605 XP_005245394 15 9605 XP_005245393 15 9605 XP_006711515 15 9605 XP_006711514 15 9605 XP_006711513 15 9605>NP_000236 Length = 1390 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S TTEMVSN Sbjct: 990 SPTTEMVSN 998>NP_001120972 Length = 1408 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S TTEMVSN Sbjct: 1008 SPTTEMVSN 1016>XP_006716054 Length = 960 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S TTEMVSN Sbjct: 560 SPTTEMVSN 568>XP_006716053 Length = 960 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S TTEMVSN Sbjct: 560 SPTTEMVSN 568>XP_006716052 Length = 1409 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S TTEMVSN Sbjct: 1009 SPTTEMVSN 1017>XP_006716051 Length = 1427 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S TTEMVSN Sbjct: 1027 SPTTEMVSN 1035>NP_073594 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 764 AATTQLVSN 772>XP_006713796 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 503 AATTQLVSN 511>XP_006713795 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 605 AATTQLVSN 613>XP_005247771 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 605 AATTQLVSN 613>XP_005247770 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 605 AATTQLVSN 613>XP_005247769 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 605 AATTQLVSN 613>XP_005247768 Length = 794 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 646 AATTQLVSN 654>XP_006713794 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 662 AATTQLVSN 670>XP_005247767 Length = 953 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSTTEMVSN 9 ++TT++VSN Sbjct: 805 AATTQLVSN 813>NP_079052 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S +TE++SN Sbjct: 212 SGSTEVISN 220>NP_001263347 Length = 2334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSTTEMVSN 9 S +EMVSN Sbjct: 911 SGASEMVSN 919>NP_055681 Length = 2357 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSTTEMVSN 9 S +EMVSN Sbjct: 911 SGASEMVSN 919>NP_570843 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSTTEMVS 8 SSTTE+ S Sbjct: 503 SSTTELTS 510>NP_001128529 Length = 587 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSTTEMVS 8 SSTTE+ S Sbjct: 509 SSTTELTS 516>NP_116321 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STTEMVSN 9 STT ++SN Sbjct: 205 STTSLISN 212>XP_005258102 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 STTEMVSN 9 STT ++SN Sbjct: 175 STTSLISN 182>XP_005254732 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S +TE++SN Sbjct: 212 SGSTEVISN 220>XP_005254731 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S +TE++SN Sbjct: 212 SGSTEVISN 220>XP_006720754 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S +TE++SN Sbjct: 212 SGSTEVISN 220>XP_005254729 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S +TE++SN Sbjct: 212 SGSTEVISN 220>XP_005254730 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S +TE++SN Sbjct: 212 SGSTEVISN 220>XP_005254728 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S +TE++SN Sbjct: 212 SGSTEVISN 220>XP_005254727 Length = 1746 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSTTEMVSN 9 S +TE++SN Sbjct: 212 SGSTEVISN 220>XP_005266194 Length = 2379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSTTEMVSN 9 S +EMVSN Sbjct: 911 SGASEMVSN 919>XP_005266191 Length = 2379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSTTEMVSN 9 S +EMVSN Sbjct: 911 SGASEMVSN 919>XP_005266190 Length = 2485 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSTTEMVSN 9 S +EMVSN Sbjct: 1059 SGASEMVSN 1067>XP_005266189 Length = 2505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSTTEMVSN 9 S +EMVSN Sbjct: 1059 SGASEMVSN 1067>NP_005091 Length = 1782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTEMVS 8 TTEMVS Sbjct: 999 TTEMVS 1004>NP_653080 Length = 1684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTEMVS 8 TTEMVS Sbjct: 901 TTEMVS 906>NP_060959 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSTTEMV 7 SSTTE++ Sbjct: 586 SSTTELI 592>XP_005267292 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTEMVS 8 TTEMVS Sbjct: 894 TTEMVS 899>XP_005267291 Length = 1684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTEMVS 8 TTEMVS Sbjct: 901 TTEMVS 906>XP_005267290 Length = 1782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTEMVS 8 TTEMVS Sbjct: 999 TTEMVS 1004>XP_005264475 Length = 2027 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSTTEMVSN 9 S TE+VSN Sbjct: 1937 SLNTELVSN 1945>XP_005245394 Length = 1741 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSTTEMV 7 SSTTE++ Sbjct: 586 SSTTELI 592>XP_005245393 Length = 2663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSTTEMV 7 SSTTE++ Sbjct: 586 SSTTELI 592>XP_006711515 Length = 2904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSTTEMV 7 SSTTE++ Sbjct: 586 SSTTELI 592>XP_006711514 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSTTEMV 7 SSTTE++ Sbjct: 586 SSTTELI 592>XP_006711513 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SSTTEMV 7 SSTTE++ Sbjct: 586 SSTTELI 592Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.275 0.0865 0.184 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 266,943 Number of extensions: 233 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |