Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 869 NP_001185763 19 869 NP_055459 19 869 XP_006726410 19 869 XP_006711719 19 869 XP_006711718 19 869 XP_006711717 19 869 XP_006711716 19 869 XP_006711715 19 869 XP_006711714 19 869 XP_006711713 19 869 XP_006711712 19 869 XP_006711711 19 869 XP_006711710 19 869 XP_006711709 19 869 XP_005277503 19 869 XP_005273038 19 869 XP_006711708 19 869 XP_005277500 19 869 XP_006711707 19 869 XP_005277499 19 869 XP_006711706 19 869 XP_006711705 19 869 XP_006711164 19 869 XP_006710140 19 869 NP_004733 17 3301 NP_001028229 17 3301 NP_056335 17 3301 NP_001265092 17 3301 NP_001265091 17 3301 NP_005725 17 3301 NP_001041665 17 3301 NP_872393 17 3301 XP_006718183 17 3301 XP_005252786 17 3301 XP_005265631 17 3301 XP_006713477 17 3301 XP_006713476 17 3301 XP_005265628 17 3301 XP_005265627 17 3301 XP_006713475 17 3301 XP_006713474 17 3301 XP_005265625 17 3301 XP_006713473 17 3301 XP_005265623 17 3301 XP_005265622 17 3301 XP_005265621 17 3301 XP_005265620 17 3301 XP_006713472 17 3301 XP_006713471 17 3301 XP_006713470 17 3301 XP_006712515 17 3301 XP_006712514 17 3301 XP_006712513 17 3301 XP_006712512 17 3301 XP_006712511 17 3301 XP_006712510 17 3301 XP_006712509 17 3301 XP_005246533 17 3301 XP_006712508 17 3301 NP_115893 17 3301 NP_055824 17 4312 NP_061897 17 4312 XP_006723740 17 4312 XP_005264775 17 4312 XP_005264436 17 4312 XP_006712098 17 4312 XP_006712097 17 4312 XP_006710329 17 4312 NP_115785 15 9605>NP_001185761 Length = 2240 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1657 ASTATLLSN 1665>NP_001185763 Length = 2362 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1763 ASTATLLSN 1771>NP_055459 Length = 2346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1763 ASTATLLSN 1771>XP_006726410 Length = 2087 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1504 ASTATLLSN 1512>XP_006711719 Length = 2302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1719 ASTATLLSN 1727>XP_006711718 Length = 1436 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 770 ASTATLLSN 778>XP_006711717 Length = 2385 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1719 ASTATLLSN 1727>XP_006711716 Length = 2411 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1828 ASTATLLSN 1836>XP_006711715 Length = 2428 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1762 ASTATLLSN 1770>XP_006711714 Length = 2429 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1763 ASTATLLSN 1771>XP_006711713 Length = 2432 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1766 ASTATLLSN 1774>XP_006711712 Length = 2473 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1926 ASTATLLSN 1934>XP_006711711 Length = 2482 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1816 ASTATLLSN 1824>XP_006711710 Length = 2494 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1828 ASTATLLSN 1836>XP_006711709 Length = 2495 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1829 ASTATLLSN 1837>XP_005277503 Length = 2498 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1926 ASTATLLSN 1934>XP_005273038 Length = 2509 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1926 ASTATLLSN 1934>XP_006711708 Length = 2512 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1926 ASTATLLSN 1934>XP_005277500 Length = 2525 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1926 ASTATLLSN 1934>XP_006711707 Length = 2553 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1926 ASTATLLSN 1934>XP_005277499 Length = 2561 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1926 ASTATLLSN 1934>XP_006711706 Length = 2591 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1925 ASTATLLSN 1933>XP_006711705 Length = 2592 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1926 ASTATLLSN 1934>XP_006711164 Length = 2087 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 1504 ASTATLLSN 1512>XP_006710140 Length = 290 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSTATLLSN 9 +STATLLSN Sbjct: 16 ASTATLLSN 24>NP_004733 Length = 1256 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1096 SSNATLLTN 1104>NP_001028229 Length = 1462 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1067 SSNATLLTN 1075>NP_056335 Length = 1287 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1095 SSNATLLTN 1103>NP_001265092 Length = 1194 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SSTATL +N Sbjct: 573 SSTATLTAN 581>NP_001265091 Length = 1194 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SSTATL +N Sbjct: 573 SSTATLTAN 581>NP_005725 Length = 1215 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SSTATL +N Sbjct: 573 SSTATLTAN 581>NP_001041665 Length = 1194 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SSTATL +N Sbjct: 573 SSTATLTAN 581>NP_872393 Length = 3234 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_006718183 Length = 1215 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SSTATL +N Sbjct: 573 SSTATLTAN 581>XP_005252786 Length = 1215 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SSTATL +N Sbjct: 573 SSTATLTAN 581>XP_005265631 Length = 1288 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1096 SSNATLLTN 1104>XP_006713477 Length = 1290 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1098 SSNATLLTN 1106>XP_006713476 Length = 1375 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 980 SSNATLLTN 988>XP_005265628 Length = 1395 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1000 SSNATLLTN 1008>XP_005265627 Length = 1425 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1030 SSNATLLTN 1038>XP_006713475 Length = 1463 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1068 SSNATLLTN 1076>XP_006713474 Length = 1465 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1070 SSNATLLTN 1078>XP_005265625 Length = 1478 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1083 SSNATLLTN 1091>XP_006713473 Length = 1479 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1084 SSNATLLTN 1092>XP_005265623 Length = 1479 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1084 SSNATLLTN 1092>XP_005265622 Length = 1481 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1086 SSNATLLTN 1094>XP_005265621 Length = 1491 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1096 SSNATLLTN 1104>XP_005265620 Length = 1492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1097 SSNATLLTN 1105>XP_006713472 Length = 1492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1097 SSNATLLTN 1105>XP_006713471 Length = 1492 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1097 SSNATLLTN 1105>XP_006713470 Length = 1493 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 SS ATLL+N Sbjct: 1098 SSNATLLTN 1106>XP_006712515 Length = 3232 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_006712514 Length = 2496 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_006712513 Length = 3220 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_006712512 Length = 3237 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_006712511 Length = 3256 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_006712510 Length = 3305 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_006712509 Length = 3319 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_005246533 Length = 3323 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>XP_006712508 Length = 3324 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>NP_115893 Length = 3258 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TATLLSN 9 TATLLSN Sbjct: 89 TATLLSN 95>NP_055824 Length = 1066 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 + TAT+LSN Sbjct: 555 TDTATILSN 563>NP_061897 Length = 2071 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 STATLLSN 9 STATLLS+ Sbjct: 1203 STATLLSS 1210>XP_006723740 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 STATLLSN 9 STATLLS+ Sbjct: 93 STATLLSS 100>XP_005264775 Length = 783 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSTATLLSN 9 + TAT+LSN Sbjct: 272 TDTATILSN 280>XP_005264436 Length = 1881 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 STATLLSN 9 STATLLS+ Sbjct: 1203 STATLLSS 1210>XP_006712098 Length = 2059 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 STATLLSN 9 STATLLS+ Sbjct: 1191 STATLLSS 1198>XP_006712097 Length = 2070 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 STATLLSN 9 STATLLS+ Sbjct: 1203 STATLLSS 1210>XP_006710329 Length = 142 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 STATLLSN 9 STATLLS+ Sbjct: 93 STATLLSS 100>NP_115785 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 STATLLSN 9 S ATLL+N Sbjct: 535 SAATLLAN 542Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.285 0.0952 0.206 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 242,239 Number of extensions: 254 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |