Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 18 1135 NP_071902 17 2528 NP_001001740 17 2528 NP_001273573 17 2528 NP_001254652 17 2528 XP_005259249 17 2528 XP_005259248 17 2528 XP_006711552 17 2528 XP_006711551 17 2528 XP_006711550 17 2528 XP_005245505 17 2528 XP_005245504 17 2528 NP_001073945 17 3301 NP_060896 17 4312 XP_005249274 17 4312 XP_005249273 17 4312 XP_005249272 17 4312 XP_005249271 17 4312 XP_006715198 17 4312 XP_005249269 17 4312 XP_005249270 17 4312 XP_005249268 17 4312 NP_056023 16 5631 NP_001190985 16 5631 NP_001077094 16 5631 XP_006722380 16 5631 XP_005258153 16 5631 XP_005258152 16 5631 XP_005258151 16 5631 XP_005258150 16 5631 XP_005258149 16 5631 NP_001866 16 7355 NP_001245340 16 7355 NP_001245342 16 7355 NP_443176 16 7355 NP_001245341 16 7355 NP_004332 16 7355 NP_001254542 16 7355 NP_001116105 16 7355 NP_001116106 16 7355 NP_001254539 16 7355 NP_001254543 16 7355 NP_722561 16 7355 NP_001254538 16 7355 NP_001254540 16 7355 NP_001254541 16 7355 NP_001245343 16 7355 XP_005255139 16 7355 XP_006721078 16 7355 XP_005255138 16 7355 XP_006721077 16 7355 XP_005255137 16 7355 XP_005264615 16 7355 XP_006712164 16 7355 XP_005264614 16 7355 XP_005264613 16 7355 XP_005264612 16 7355 XP_006711316 16 7355 XP_005245114 16 7355 XP_005245113 16 7355 XP_006711315 16 7355 XP_005245112 16 7355 XP_006711314 16 7355 NP_079285 15 9605 XP_005265845 15 9605 XP_006714118 15 9605 XP_005248231 15 9605 NP_060793 15 9605 NP_067680 15 9605>NP_004251 Length = 1208 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSVEFD V Sbjct: 982 SSSVEFDMV 990>NP_071902 Length = 731 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSVEFDR 8 SS+EFDR Sbjct: 425 SSIEFDR 431>NP_001001740 Length = 707 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSVEFDR 8 SS+EFDR Sbjct: 401 SSIEFDR 407>NP_001273573 Length = 491 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSVEFDR 8 SS+EFDR Sbjct: 185 SSIEFDR 191>NP_001254652 Length = 512 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SVEFDRV 9 SVEFDR+ Sbjct: 125 SVEFDRI 131>XP_005259249 Length = 512 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SVEFDRV 9 SVEFDR+ Sbjct: 125 SVEFDRI 131>XP_005259248 Length = 520 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SVEFDRV 9 SVEFDR+ Sbjct: 133 SVEFDRI 139>XP_006711552 Length = 420 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSVEFDR 8 SS+EFDR Sbjct: 114 SSIEFDR 120>XP_006711551 Length = 589 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSVEFDR 8 SS+EFDR Sbjct: 425 SSIEFDR 431>XP_006711550 Length = 708 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSVEFDR 8 SS+EFDR Sbjct: 402 SSIEFDR 408>XP_005245505 Length = 711 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSVEFDR 8 SS+EFDR Sbjct: 405 SSIEFDR 411>XP_005245504 Length = 727 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SSVEFDR 8 SS+EFDR Sbjct: 421 SSIEFDR 427>NP_001073945 Length = 290 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 S+ +EFDRV Sbjct: 131 STDLEFDRV 139>NP_060896 Length = 832 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 113 SSSVDFDQ 120>XP_005249274 Length = 832 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 113 SSSVDFDQ 120>XP_005249273 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 122 SSSVDFDQ 129>XP_005249272 Length = 819 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 100 SSSVDFDQ 107>XP_005249271 Length = 828 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 109 SSSVDFDQ 116>XP_006715198 Length = 832 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 113 SSSVDFDQ 120>XP_005249269 Length = 832 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 113 SSSVDFDQ 120>XP_005249270 Length = 832 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 113 SSSVDFDQ 120>XP_005249268 Length = 841 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSVEFDR 8 SSSV+FD+ Sbjct: 122 SSSVDFDQ 129>NP_056023 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 688 SVEFDR 693>NP_001190985 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 665 SVEFDR 670>NP_001077094 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 665 SVEFDR 670>XP_006722380 Length = 1769 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 395 SVEFDR 400>XP_005258153 Length = 2037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 663 SVEFDR 668>XP_005258152 Length = 2060 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 686 SVEFDR 691>XP_005258151 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 688 SVEFDR 693>XP_005258150 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 688 SVEFDR 693>XP_005258149 Length = 2062 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SVEFDR 8 SVEFDR Sbjct: 688 SVEFDR 693>NP_001866 Length = 1500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 988 SSVEFD 993>NP_001245340 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 555 SSSVQFEMV 563>NP_001245342 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 526 SSSVQFEMV 534>NP_443176 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 590 SSSVQFEMV 598>NP_001245341 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 520 SSSVQFEMV 528>NP_004332 Length = 2225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 947 SSVEFD 952>NP_001254542 Length = 451 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 89 SSVEFD 94>NP_001116105 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 994 SSVEFD 999>NP_001116106 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 537 SSVEFD 542>NP_001254539 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 167 SSVEFD 172>NP_001254543 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 53 SSVEFD 58>NP_722561 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 167 SSVEFD 172>NP_001254538 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 187 SSVEFD 192>NP_001254540 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 184 SSVEFD 189>NP_001254541 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 35 SSVEFD 40>NP_001245343 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 434 SSSVQFEMV 442>XP_005255139 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 429 SSSVQFEMV 437>XP_006721078 Length = 576 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 491 SSSVQFEMV 499>XP_005255138 Length = 583 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 498 SSSVQFEMV 506>XP_006721077 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 570 SSSVQFEMV 578>XP_005255137 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 SSSV+F+ V Sbjct: 590 SSSVQFEMV 598>XP_005264615 Length = 2162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 884 SSVEFD 889>XP_006712164 Length = 2179 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 884 SSVEFD 889>XP_005264614 Length = 2191 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 947 SSVEFD 952>XP_005264613 Length = 2208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 947 SSVEFD 952>XP_005264612 Length = 2242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 947 SSVEFD 952>XP_006711316 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 167 SSVEFD 172>XP_005245114 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 167 SSVEFD 172>XP_005245113 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 167 SSVEFD 172>XP_006711315 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 167 SSVEFD 172>XP_005245112 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 187 SSVEFD 192>XP_006711314 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SSVEFD 7 SSVEFD Sbjct: 190 SSVEFD 195>NP_079285 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 S ++EF+RV Sbjct: 997 SKNLEFERV 1005>XP_005265845 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 S ++EF+RV Sbjct: 640 SKNLEFERV 648>XP_006714118 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSSVEFDRV 9 S ++EF+RV Sbjct: 986 SKNLEFERV 994>XP_005248231 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SSSVEFDR 8 SSS E DR Sbjct: 76 SSSAELDR 83>NP_060793 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SSSVEFDR 8 SSS E DR Sbjct: 76 SSSAELDR 83>NP_067680 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SSVEFDRV 9 S +EFDR+ Sbjct: 362 SLLEFDRI 369Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.121 0.293 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 445,248 Number of extensions: 458 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |