Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_006711412 18 1935 NP_001243000 17 3301 NP_689412 17 3301 NP_689410 17 3301 NP_006231 17 3301 NP_003984 17 3301 XP_005276801 17 3301 XP_005276799 17 3301 XP_005274610 17 3301 XP_005257603 17 3301 XP_006722058 17 3301 XP_005257602 17 3301 XP_005244935 17 3301 XP_005244933 17 3301 NP_001273171 16 5631 NP_001511 16 5631 NP_996806 16 5631 XP_006721105 16 5631 NP_061925 16 7355 NP_001099034 16 7355 NP_001099033 16 7355 NP_065802 16 7355 NP_001010848 16 7355 NP_001138551 16 7355 NP_001159444 16 7355 NP_001159445 16 7355 XP_006726067 16 7355 XP_005275480 16 7355 XP_005275479 16 7355 XP_006726066 16 7355 XP_005275322 16 7355 XP_005275194 16 7355 XP_005275048 16 7355 XP_005275047 16 7355 XP_005275045 16 7355 XP_005275044 16 7355 XP_006725765 16 7355 XP_005272893 16 7355 XP_005272892 16 7355 XP_005272890 16 7355 XP_005272889 16 7355 XP_006725551 16 7355 XP_005269501 16 7355 XP_006715182 16 7355 NP_001025147 15 9605 NP_008889 15 9605 NP_001258857 15 9605 NP_001258856 15 9605 NP_060046 15 9605 NP_149977 15 9605 XP_006724490 15 9605 XP_006724489 15 9605 XP_005262012 15 9605 XP_005252149 15 9605 XP_005252148 15 9605 XP_005252147 15 9605 XP_005252146 15 9605 XP_006717239 15 9605 XP_005272398 15 9605 XP_006712163 15 9605 XP_005264606 15 9605 XP_006712161 15 9605 XP_005264605 15 9605 XP_005264604 15 9605>XP_006711412 Length = 636 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS RTRR Sbjct: 38 SSSSQRTRR 46>NP_001243000 Length = 5207 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 SSS+LRTR Sbjct: 2110 SSSALRTR 2117>NP_689412 Length = 591 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS +TRR Sbjct: 4 SSSSTKTRR 12>NP_689410 Length = 625 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS +TRR Sbjct: 4 SSSSTKTRR 12>NP_006231 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS +TRR Sbjct: 4 SSSSTKTRR 12>NP_003984 Length = 498 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS RTRR Sbjct: 36 SSSSDRTRR 44>XP_005276801 Length = 497 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS RTRR Sbjct: 36 SSSSDRTRR 44>XP_005276799 Length = 499 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS RTRR Sbjct: 36 SSSSDRTRR 44>XP_005274610 Length = 653 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS +TRR Sbjct: 4 SSSSTKTRR 12>XP_005257603 Length = 5256 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 SSS+LRTR Sbjct: 2159 SSSALRTR 2166>XP_006722058 Length = 5256 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 SSS+LRTR Sbjct: 2159 SSSALRTR 2166>XP_005257602 Length = 5256 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 SSS+LRTR Sbjct: 2159 SSSALRTR 2166>XP_005244935 Length = 497 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS RTRR Sbjct: 36 SSSSDRTRR 44>XP_005244933 Length = 499 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSS RTRR Sbjct: 36 SSSSDRTRR 44>NP_001273171 Length = 2084 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSSL+T R Sbjct: 592 SSSSLKTGR 600>NP_001511 Length = 2109 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSSL+T R Sbjct: 592 SSSSLKTGR 600>NP_996806 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSSL TR+ Sbjct: 160 SSSSLGTRK 168>XP_006721105 Length = 2046 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSSSL+T R Sbjct: 592 SSSSLKTGR 600>NP_061925 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>NP_001099034 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 292 SLSSLETRR 300>NP_001099033 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 256 SLSSLETRR 264>NP_065802 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSLRTRR 9 +SLRTRR Sbjct: 67 NSLRTRR 73>NP_001010848 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSS L+T+R Sbjct: 530 SSSGLKTQR 538>NP_001138551 Length = 615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SSLRTRR 9 +SLRTRR Sbjct: 67 NSLRTRR 73>NP_001159444 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSS L+T+R Sbjct: 529 SSSGLKTQR 537>NP_001159445 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSS L+T+R Sbjct: 333 SSSGLKTQR 341>XP_006726067 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005275480 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005275479 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 292 SLSSLETRR 300>XP_006726066 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 273 SLSSLETRR 281>XP_005275322 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005275194 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005275048 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005275047 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005275045 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005275044 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_006725765 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005272893 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005272892 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005272890 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005272889 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_006725551 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 203 SLSSLETRR 211>XP_005269501 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 SSS L+T+R Sbjct: 554 SSSGLKTQR 562>XP_006715182 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 S SSL TRR Sbjct: 273 SLSSLETRR 281>NP_001025147 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SLRTRR 9 SLRTRR Sbjct: 3 SLRTRR 8>NP_008889 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SLRTRR 9 SLRTRR Sbjct: 3 SLRTRR 8>NP_001258857 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 S+SSLRT+ Sbjct: 1185 SASSLRTQ 1192>NP_001258856 Length = 1335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 S+SSLRT+ Sbjct: 1216 SASSLRTQ 1223>NP_060046 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 S+SSLRT+ Sbjct: 1282 SASSLRTQ 1289>NP_149977 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 SSSS TRR Sbjct: 697 SSSSRTTRR 705>XP_006724490 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 SSSS TRR Sbjct: 642 SSSSRTTRR 650>XP_006724489 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 SSSS TRR Sbjct: 642 SSSSRTTRR 650>XP_005262012 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSSSLRTRR 9 SSSS TRR Sbjct: 672 SSSSRTTRR 680>XP_005252149 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 S+SSLRT+ Sbjct: 802 SASSLRTQ 809>XP_005252148 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 S+SSLRT+ Sbjct: 924 SASSLRTQ 931>XP_005252147 Length = 1329 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 S+SSLRT+ Sbjct: 1210 SASSLRTQ 1217>XP_005252146 Length = 1342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 S+SSLRT+ Sbjct: 1223 SASSLRTQ 1230>XP_006717239 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSSSLRTR 8 S+SSLRT+ Sbjct: 1282 SASSLRTQ 1289>XP_005272398 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SLRTRR 9 SLRTRR Sbjct: 3 SLRTRR 8>XP_006712163 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 S+SSL TR+ Sbjct: 156 STSSLNTRQ 164>XP_005264606 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 S+SSL TR+ Sbjct: 192 STSSLNTRQ 200>XP_006712161 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 S+SSL TR+ Sbjct: 192 STSSLNTRQ 200>XP_005264605 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 S+SSL TR+ Sbjct: 200 STSSLNTRQ 208>XP_005264604 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSSLRTRR 9 S+SSL TR+ Sbjct: 205 STSSLNTRQ 213Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.106 0.234 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 366,914 Number of extensions: 720 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |