Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 17 3301 XP_006716142 17 3301 XP_005250088 17 3301 XP_006716141 17 3301 XP_005250085 17 3301 XP_006716140 17 3301 XP_005250084 17 3301 XP_005250083 17 3301 XP_005250082 17 3301 NP_056080 16 7355 NP_001165980 16 7355 NP_001165988 16 7355 XP_005246453 16 7355 XP_006712435 16 7355 NP_079510 15 9605 NP_055665 15 9605 NP_001028289 15 9605 XP_006726390 15 9605 XP_006726389 15 9605 XP_006726388 15 9605 XP_006726387 15 9605 XP_005254755 15 9605 XP_006713496 15 9605 XP_006713122 15 9605 XP_006713118 15 9605 XP_006713117 15 9605 XP_006713114 15 9605 XP_006713110 15 9605 XP_006713109 15 9605 XP_006713108 15 9605 XP_006713107 15 9605 XP_006713106 15 9605 XP_006713102 15 9605 XP_006713101 15 9605 XP_006713100 15 9605 XP_006713099 15 9605 XP_006711142 15 9605 XP_006711141 15 9605 XP_006711140 15 9605 XP_006710131 15 9605 XP_006710130 15 9605 XP_006710129 15 9605 XP_006710128 15 9605>NP_733751 Length = 4911 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 771 SSSADISKA 779>XP_006716142 Length = 4927 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 772 SSSADISKA 780>XP_005250088 Length = 4928 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 772 SSSADISKA 780>XP_006716141 Length = 4959 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 772 SSSADISKA 780>XP_005250085 Length = 4979 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 772 SSSADISKA 780>XP_006716140 Length = 4982 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 772 SSSADISKA 780>XP_005250084 Length = 4982 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 772 SSSADISKA 780>XP_005250083 Length = 4982 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 771 SSSADISKA 779>XP_005250082 Length = 4983 Score = 16.9 bits (32), Expect = 3301 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSSAD SKA Sbjct: 772 SSSADISKA 780>NP_056080 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SADKSKA 9 +ADKSKA Sbjct: 719 NADKSKA 725>NP_001165980 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SADKSKA 9 +ADKSKA Sbjct: 719 NADKSKA 725>NP_001165988 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SADKSKA 9 +ADKSKA Sbjct: 719 NADKSKA 725>XP_005246453 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SADKSKA 9 +ADKSKA Sbjct: 661 NADKSKA 667>XP_006712435 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SADKSKA 9 +ADKSKA Sbjct: 719 NADKSKA 725>NP_079510 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSSADKS 7 SSS+DKS Sbjct: 249 SSSSDKS 255>NP_055665 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSSADKS 7 +SSADKS Sbjct: 1090 NSSADKS 1096>NP_001028289 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSSADKS 7 +SSADKS Sbjct: 1066 NSSADKS 1072>XP_006726390 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006726389 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006726388 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006726387 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_005254755 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSSADKS 7 SSS+DKS Sbjct: 249 SSSSDKS 255>XP_006713496 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSSADKS 7 +SSADKS Sbjct: 582 NSSADKS 588>XP_006713122 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713118 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 458 SSSPDKNEA 466>XP_006713117 Length = 1334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 464 SSSPDKNEA 472>XP_006713114 Length = 1523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713110 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713109 Length = 1537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713108 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713107 Length = 1544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713106 Length = 1545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713102 Length = 1554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713101 Length = 1561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006713100 Length = 1561 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 691 SSSPDKNEA 699>XP_006713099 Length = 1562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 SSS DK++A Sbjct: 692 SSSPDKNEA 700>XP_006711142 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006711141 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006711140 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006710131 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006710130 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006710129 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436>XP_006710128 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSSADKSKA 9 +SSA K+KA Sbjct: 428 ASSASKNKA 436Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.263 0.0795 0.161 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 417,124 Number of extensions: 418 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 19 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |