Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 665 NP_000170 19 665 XP_005264328 19 665 NP_060250 18 1935 XP_005251324 18 1935 XP_005251323 18 1935 NP_001073881 17 4312 XP_006713622 17 4312 XP_005247320 17 4312 XP_005247319 17 4312 XP_005247318 17 4312 XP_005247315 17 4312 XP_005247314 17 4312 XP_005247313 17 4312 XP_005247312 17 4312 NP_000468 16 7355 NP_612465 16 7355 NP_001273723 16 7355 NP_056986 16 7355 NP_001269802 16 7355 NP_079410 16 7355 NP_001009811 16 7355 NP_055799 16 7355 XP_005257233 16 7355 XP_005257231 16 7355 XP_005256233 16 7355 XP_005256232 16 7355 XP_005256231 16 7355 XP_005256229 16 7355 XP_005256228 16 7355 XP_005256227 16 7355 XP_006721346 16 7355 XP_005256226 16 7355 XP_006721345 16 7355 XP_006721344 16 7355 XP_006721343 16 7355 XP_005256225 16 7355 XP_005251019 16 7355 XP_005251017 16 7355 XP_005251016 16 7355 XP_005251014 16 7355 XP_005251013 16 7355 XP_006713871 16 7355 XP_006713870 16 7355 NP_001139669 16 7355 NP_203528 16 7355 NP_001123520 15 9605 NP_001123522 15 9605 NP_060244 15 9605 NP_997201 15 9605 NP_001269475 15 9605 NP_001269476 15 9605 NP_114406 15 9605 NP_002627 15 9605 XP_006726161 15 9605 XP_006726160 15 9605 XP_005262136 15 9605 XP_006719995 15 9605 XP_006719988 15 9605 XP_006715190 15 9605 XP_006715173 15 9605 XP_006715172 15 9605 NP_077084 15 9605>NP_001268421 Length = 1230 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 SSRQIKK+R Sbjct: 111 SSRQIKKRR 119>NP_000170 Length = 1360 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 SSRQIKK+R Sbjct: 241 SSRQIKKRR 249>XP_005264328 Length = 1261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 SSRQIKK+R Sbjct: 142 SSRQIKKRR 150>NP_060250 Length = 2997 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 SSRQ+K++R Sbjct: 750 SSRQVKRKR 758Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SSR +KKQ+ Sbjct: 807 SSRSVKKQK 815>XP_005251324 Length = 2996 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 SSRQ+K++R Sbjct: 750 SSRQVKRKR 758Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SSR +KKQ+ Sbjct: 807 SSRSVKKQK 815>XP_005251323 Length = 2997 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 SSRQ+K++R Sbjct: 750 SSRQVKRKR 758Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SSR +KKQ+ Sbjct: 807 SSRSVKKQK 815>NP_001073881 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_006713622 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247320 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247319 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247318 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247315 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247314 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247313 Length = 1196 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 929 SRQLKKMR 936>XP_005247312 Length = 1231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRQIKKQR 9 SRQ+KK R Sbjct: 964 SRQLKKMR 971>NP_000468 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 RQIKKQ 8 RQIKKQ Sbjct: 545 RQIKKQ 550>NP_612465 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIKKQR 9 RQ+KKQ+ Sbjct: 20 RQLKKQK 26>NP_001273723 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIKKQR 9 +Q+KKQR Sbjct: 8 QQVKKQR 14>NP_056986 Length = 2799 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SS+QI KQ+ Sbjct: 2778 SSKQILKQK 2786>NP_001269802 Length = 2798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SS+QI KQ+ Sbjct: 2777 SSKQILKQK 2785>NP_079410 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>NP_001009811 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRQIKKQR 9 SRQ+++QR Sbjct: 610 SRQLQRQR 617>NP_055799 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRQIKKQR 9 SRQ+++QR Sbjct: 610 SRQLQRQR 617>XP_005257233 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRQIKKQR 9 SRQ+++QR Sbjct: 610 SRQLQRQR 617>XP_005257231 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRQIKKQR 9 SRQ+++QR Sbjct: 610 SRQLQRQR 617>XP_005256233 Length = 2391 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 129 SNRQIKRKK 137>XP_005256232 Length = 2424 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 162 SNRQIKRKK 170>XP_005256231 Length = 2573 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_005256229 Length = 2881 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_005256228 Length = 2882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_005256227 Length = 2897 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_006721346 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_005256226 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_006721345 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_006721344 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_006721343 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_005256225 Length = 2898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SSRQIKKQR 9 S+RQIK+++ Sbjct: 636 SNRQIKRKK 644>XP_005251019 Length = 1811 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SS+QI KQ+ Sbjct: 1790 SSKQILKQK 1798>XP_005251017 Length = 2792 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SS+QI KQ+ Sbjct: 2771 SSKQILKQK 2779>XP_005251016 Length = 2795 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SS+QI KQ+ Sbjct: 2774 SSKQILKQK 2782>XP_005251014 Length = 2800 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SS+QI KQ+ Sbjct: 2779 SSKQILKQK 2787>XP_005251013 Length = 2801 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 SS+QI KQ+ Sbjct: 2780 SSKQILKQK 2788>XP_006713871 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIKKQR 9 RQ++KQR Sbjct: 381 RQVEKQR 387>XP_006713870 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIKKQR 9 RQ++KQR Sbjct: 620 RQVEKQR 626>NP_001139669 Length = 7081 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSRQIKKQ 8 S RQ+KKQ Sbjct: 3464 SPRQMKKQ 3471>NP_203528 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIKKQR 9 RQ++KQR Sbjct: 618 RQVEKQR 624>NP_001123520 Length = 2068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSRQIKKQ 8 SSR +KK+ Sbjct: 9 SSRSVKKE 16>NP_001123522 Length = 1253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSRQIKKQ 8 SSR +KK+ Sbjct: 9 SSRSVKKE 16>NP_060244 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QIKKQR 9 Q+KKQR Sbjct: 411 QVKKQR 416>NP_997201 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIKKQR 9 RQ+K+QR Sbjct: 348 RQLKEQR 354>NP_001269475 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRQIKKQR 9 SSR +KK + Sbjct: 131 SSRMVKKMK 139>NP_001269476 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRQIKKQR 9 SSR +KK + Sbjct: 126 SSRMVKKMK 134>NP_114406 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRQIKKQR 9 SSR +KK + Sbjct: 126 SSRMVKKMK 134>NP_002627 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 S R+IKK++ Sbjct: 318 SGREIKKRK 326>XP_006726161 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 S R+IKK++ Sbjct: 286 SGREIKKRK 294>XP_006726160 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 S R+IKK++ Sbjct: 318 SGREIKKRK 326>XP_005262136 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIKKQR 9 RQ+K+QR Sbjct: 305 RQLKEQR 311>XP_006719995 Length = 2106 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSRQIKKQ 8 SSR +KK+ Sbjct: 9 SSRSVKKE 16>XP_006719988 Length = 2129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSRQIKKQ 8 SSR +KK+ Sbjct: 9 SSRSVKKE 16>XP_006715190 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QIKKQR 9 Q+KKQR Sbjct: 411 QVKKQR 416>XP_006715173 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 S R+IKK++ Sbjct: 286 SGREIKKRK 294>XP_006715172 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 S R+IKK++ Sbjct: 318 SGREIKKRK 326>NP_077084 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SSRQIKKQR 9 S R+IKK++ Sbjct: 318 SGREIKKRK 326Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.114 0.259 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 451,155 Number of extensions: 826 Number of successful extensions: 66 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |