Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 18 1482 NP_001166935 17 3301 NP_060111 17 3301 NP_001166934 17 3301 NP_001166936 17 3301 NP_001361 17 3301 NP_060066 17 3301 NP_001239029 17 3301 NP_001239032 17 3301 NP_001239031 17 3301 XP_006719559 17 3301 XP_006719558 17 3301 XP_005269072 17 3301 XP_005269071 17 3301 XP_005269070 17 3301 XP_006719557 17 3301 XP_005269069 17 3301 XP_006719556 17 3301 XP_005269068 17 3301 XP_005269067 17 3301 XP_005269066 17 3301 XP_005269065 17 3301 XP_005269064 17 3301 XP_006712019 17 3301 NP_068781 16 7355 NP_001153218 16 7355 NP_001123292 16 7355 NP_001269078 16 7355 NP_001083 16 7355 NP_001164224 16 7355 NP_659454 16 7355 XP_006725360 16 7355 XP_006725359 16 7355 XP_006725358 16 7355 XP_006725357 16 7355 XP_006725356 16 7355 XP_006725355 16 7355 XP_005258025 16 7355 XP_006721575 16 7355 XP_006721574 16 7355 XP_006721573 16 7355 XP_006721572 16 7355 XP_006721571 16 7355 XP_006721570 16 7355 XP_006721569 16 7355 NP_057079 16 7355 NP_008986 15 9605 NP_113626 15 9605 NP_036347 15 9605 NP_001245213 15 9605 XP_006717660 15 9605 XP_005272154 15 9605 XP_005272153 15 9605 XP_005272152 15 9605 NP_001004686 15 9605 NP_787107 15 9605 NP_001001963 15 9605 NP_001004687 15 9605>NP_004251 Length = 1208 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSRAVAHIF 9 SSRAVA IF Sbjct: 1156 SSRAVARIF 1164>NP_001166935 Length = 1674 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>NP_060111 Length = 1661 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>NP_001166934 Length = 1637 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>NP_001166936 Length = 1621 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>NP_001361 Length = 4158 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 S RAV HI+ Sbjct: 237 SQRAVTHIY 245>NP_060066 Length = 1624 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RAVAHIF 9 RA+AH+F Sbjct: 115 RAIAHLF 121>NP_001239029 Length = 1637 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RAVAHIF 9 RA+AH+F Sbjct: 115 RAIAHLF 121>NP_001239032 Length = 1610 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RAVAHIF 9 RA+AH+F Sbjct: 115 RAIAHLF 121>NP_001239031 Length = 1623 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RAVAHIF 9 RA+AH+F Sbjct: 115 RAIAHLF 121>XP_006719559 Length = 1650 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_006719558 Length = 1644 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269072 Length = 1607 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269071 Length = 1614 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269070 Length = 1627 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_006719557 Length = 1631 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269069 Length = 1632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_006719556 Length = 1655 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269068 Length = 1657 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269067 Length = 1662 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269066 Length = 1668 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269065 Length = 1670 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_005269064 Length = 1675 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRAVAHIF 9 SRAV H+F Sbjct: 115 SRAVKHLF 122>XP_006712019 Length = 4158 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 S RAV HI+ Sbjct: 237 SQRAVTHIY 245>NP_068781 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 314 SSRKLRHVF 322>NP_001153218 Length = 813 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 268 SSRKLRHVF 276>NP_001123292 Length = 912 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SSRAVAHIF 9 +SRA+ H++ Sbjct: 895 ASRAIKHLY 903>NP_001269078 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 96 SSRKLRHVF 104>NP_001083 Length = 822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 277 SSRKLRHVF 285>NP_001164224 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSRAVAH 7 SSR VAH Sbjct: 398 SSRCVAH 404>NP_659454 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSRAVAH 7 SSR VAH Sbjct: 418 SSRCVAH 424>XP_006725360 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 224 SSRKLRHVF 232>XP_006725359 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 268 SSRKLRHVF 276>XP_006725358 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 268 SSRKLRHVF 276>XP_006725357 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 277 SSRKLRHVF 285>XP_006725356 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 314 SSRKLRHVF 322>XP_006725355 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 326 SSRKLRHVF 334>XP_005258025 Length = 912 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 SSRAVAHIF 9 +SRA+ H++ Sbjct: 895 ASRAIKHLY 903>XP_006721575 Length = 776 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 224 SSRKLRHVF 232>XP_006721574 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 268 SSRKLRHVF 276>XP_006721573 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 268 SSRKLRHVF 276>XP_006721572 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 277 SSRKLRHVF 285>XP_006721571 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 314 SSRKLRHVF 322>XP_006721570 Length = 1118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 573 SSRKLRHVF 581>XP_006721569 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSRAVAHIF 9 SSR + H+F Sbjct: 573 SSRKLRHVF 581>NP_057079 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSRAVAH 7 SSRAV H Sbjct: 19 SSRAVVH 25>NP_008986 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRAVAHI 8 SRAV HI Sbjct: 1208 SRAVIHI 1214>NP_113626 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRAVAH 7 SRA+AH Sbjct: 444 SRAIAH 449>NP_036347 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSRAVAH 7 SSR VAH Sbjct: 398 SSRQVAH 404>NP_001245213 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRAVAHIF 9 SRA+ H F Sbjct: 170 SRAINHFF 177>XP_006717660 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SRAVAHI 8 SRAV HI Sbjct: 1187 SRAVIHI 1193>XP_005272154 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRAVAH 7 SRA+AH Sbjct: 426 SRAIAH 431>XP_005272153 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRAVAH 7 SRA+AH Sbjct: 426 SRAIAH 431>XP_005272152 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SRAVAH 7 SRA+AH Sbjct: 444 SRAIAH 449>NP_001004686 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRAVAHIF 9 SRA+ H F Sbjct: 170 SRAINHFF 177>NP_787107 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRAVAHIF 9 SRA+ H F Sbjct: 170 SRAIDHFF 177>NP_001001963 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRAVAHIF 9 SRA+ H F Sbjct: 170 SRAINHFF 177>NP_001004687 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SRAVAHIF 9 SRA+ H F Sbjct: 170 SRAINHFF 177Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.128 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 371,310 Number of extensions: 303 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |