Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 390 NP_036462 20 390 NP_001243397 20 390 XP_005269721 20 390 NP_001004308 17 3301 NP_006648 17 4312 NP_996848 17 4312 XP_006724025 17 4312 XP_006724024 17 4312 XP_006724023 17 4312 NP_060959 16 5631 XP_005265796 16 5631 XP_005245393 16 5631 XP_006711515 16 5631 XP_006711514 16 5631 XP_006711513 16 5631 NP_001019782 16 5631 NP_060531 16 7355 NP_000875 16 7355 XP_005256244 16 7355 XP_006721357 16 7355 XP_006721356 16 7355 XP_006713191 16 7355 NP_001153685 16 7355 NP_112583 16 7355 NP_001122302 15 9605 NP_001122303 15 9605 NP_001158302 15 9605 NP_001122301 15 9605 NP_001729 15 9605 NP_001714 15 9605 NP_001156787 15 9605 NP_004652 15 9605 NP_001012999 15 9605 NP_002949 15 9605 XP_005249383 15 9605 XP_005272107 15 9605 XP_005272105 15 9605 NP_940857 15 9605 NP_001005861 15 9605>NP_001243398 Length = 1781 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SSQQLAQC 8 SSQQLAQC Sbjct: 1470 SSQQLAQC 1477>NP_036462 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SSQQLAQC 8 SSQQLAQC Sbjct: 1762 SSQQLAQC 1769>NP_001243397 Length = 1890 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SSQQLAQC 8 SSQQLAQC Sbjct: 1579 SSQQLAQC 1586>XP_005269721 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 SSQQLAQC 8 SSQQLAQC Sbjct: 1762 SSQQLAQC 1769>NP_001004308 Length = 310 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQQLAQCG 9 SQQL CG Sbjct: 104 SQQLESCG 111>NP_006648 Length = 541 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QQLAQCG 9 Q+LA+CG Sbjct: 466 QELARCG 472>NP_996848 Length = 541 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QQLAQCG 9 Q+LA+CG Sbjct: 466 QELARCG 472>XP_006724025 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QQLAQCG 9 Q+LA+CG Sbjct: 509 QELARCG 515>XP_006724024 Length = 584 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QQLAQCG 9 Q+LA+CG Sbjct: 509 QELARCG 515>XP_006724023 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QQLAQCG 9 Q+LA+CG Sbjct: 466 QELARCG 472>NP_060959 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQLAQCG 9 QQL +CG Sbjct: 2265 QQLCKCG 2271>XP_005265796 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSQQLAQCG 9 SSQ QCG Sbjct: 484 SSQSPGQCG 492>XP_005245393 Length = 2663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQLAQCG 9 QQL +CG Sbjct: 2265 QQLCKCG 2271>XP_006711515 Length = 2904 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQLAQCG 9 QQL +CG Sbjct: 2205 QQLCKCG 2211>XP_006711514 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQLAQCG 9 QQL +CG Sbjct: 2265 QQLCKCG 2271>XP_006711513 Length = 2964 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 QQLAQCG 9 QQL +CG Sbjct: 2265 QQLCKCG 2271>NP_001019782 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSQQLAQCG 9 SSQ QCG Sbjct: 484 SSQSPGQCG 492>NP_060531 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSQQLAQCG 9 ++QQ QCG Sbjct: 22 AAQQQQQCG 30>NP_000875 Length = 514 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSQQLAQCG 9 ++QQL CG Sbjct: 19 TAQQLFNCG 27>XP_005256244 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSQQLAQC 8 ++QQ AQC Sbjct: 482 AAQQAAQC 489>XP_006721357 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSQQLAQC 8 ++QQ AQC Sbjct: 482 AAQQAAQC 489>XP_006721356 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSQQLAQC 8 ++QQ AQC Sbjct: 482 AAQQAAQC 489>XP_006713191 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSQQLAQCG 9 ++QQL CG Sbjct: 89 TAQQLFNCG 97>NP_001153685 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSQQLAQC 8 ++QQ AQC Sbjct: 337 AAQQAAQC 344>NP_112583 Length = 1007 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSQQLAQC 8 ++QQ AQC Sbjct: 482 AAQQAAQC 489>NP_001122302 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSQQLAQ 7 SS+QLAQ Sbjct: 220 SSEQLAQ 226>NP_001122303 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSQQLAQ 7 SS+QLAQ Sbjct: 220 SSEQLAQ 226>NP_001158302 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSQQLAQ 7 SS+QLAQ Sbjct: 220 SSEQLAQ 226>NP_001122301 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSQQLAQ 7 SS+QLAQ Sbjct: 220 SSEQLAQ 226>NP_001729 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SSQQLAQ 7 SS+QLAQ Sbjct: 220 SSEQLAQ 226>NP_001714 Length = 2649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SQQLAQC 8 +QQL QC Sbjct: 2514 AQQLRQC 2520>NP_001156787 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSQQLAQCG 9 S+QQ +CG Sbjct: 288 SAQQQHECG 296>NP_004652 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SQQLAQC 8 S+Q AQC Sbjct: 483 SEQAAQC 489>NP_001012999 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 SQQLAQCG 9 ++QL +CG Sbjct: 535 AEQLRECG 542>NP_002949 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 QQLAQC 8 QQL QC Sbjct: 590 QQLVQC 595>XP_005249383 Length = 3186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SQQLAQC 8 +QQL QC Sbjct: 3051 AQQLRQC 3057>XP_005272107 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSQQLAQCG 9 S+QQ +CG Sbjct: 288 SAQQQHECG 296>XP_005272105 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSQQLAQCG 9 S+QQ +CG Sbjct: 288 SAQQQHECG 296>NP_940857 Length = 5147 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSQQLAQCG 9 +SQ+ A CG Sbjct: 2597 ASQERAPCG 2605>NP_001005861 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 QQLAQC 8 QQL QC Sbjct: 593 QQLVQC 598Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.114 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 463,031 Number of extensions: 516 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |