Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 18 1135 NP_004561 18 1135 NP_001275703 18 1135 XP_005253450 18 1135 XP_006719151 18 1135 NP_775105 17 2528 NP_001036148 17 2528 XP_006715506 17 2528 XP_006715505 17 2528 XP_006715504 17 2528 XP_006715503 17 2528 XP_006715502 17 2528 XP_005270863 17 3301 XP_005270862 17 3301 XP_006710667 17 3301 XP_006710666 17 3301 NP_001139108 17 3301 NP_733936 16 5631 NP_001071 16 5631 NP_950245 16 5631 NP_001243057 16 5631 NP_001243056 16 5631 NP_001121683 16 5631 NP_116258 16 5631 XP_006716736 16 5631 NP_061028 16 7355 NP_065795 16 7355 NP_001190187 16 7355 NP_056178 16 7355 NP_001139799 16 7355 NP_001139798 16 7355 NP_004680 16 7355 NP_542172 16 7355 XP_005264515 16 7355 XP_005264513 16 7355 NP_848519 15 9605 NP_001164111 15 9605 NP_036251 15 9605 NP_001138890 15 9605 NP_001164110 15 9605 NP_001034892 15 9605 NP_036221 15 9605 NP_001264880 15 9605 NP_001264876 15 9605 NP_001264878 15 9605 NP_783163 15 9605 NP_037423 15 9605 NP_001099022 15 9605 NP_001099021 15 9605 NP_001099020 15 9605 NP_001099019 15 9605 NP_001268366 15 9605 NP_004730 15 9605 NP_001264881 15 9605 NP_001264877 15 9605 NP_001264875 15 9605 NP_060770 15 9605 NP_001268367 15 9605 NP_001264874 15 9605 NP_008933 15 9605 XP_006724234 15 9605 XP_005261462 15 9605 XP_005260314 15 9605 XP_005251917 15 9605 XP_006716612 15 9605 XP_006716611 15 9605 XP_006711818 15 9605 XP_006711817 15 9605>NP_001275701 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSN YLIQV Sbjct: 1258 SSNLYLIQV 1266>NP_004561 Length = 1445 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSN YLIQV Sbjct: 1217 SSNLYLIQV 1225>NP_001275703 Length = 1264 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSN YLIQV Sbjct: 1036 SSNLYLIQV 1044>XP_005253450 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSN YLIQV Sbjct: 1258 SSNLYLIQV 1266>XP_006719151 Length = 1486 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSN YLIQV Sbjct: 1258 SSNLYLIQV 1266>NP_775105 Length = 1659 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSNQ+LI V Sbjct: 145 SSNQFLIYV 153>NP_001036148 Length = 1683 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSNQ+LI V Sbjct: 145 SSNQFLIYV 153>XP_006715506 Length = 1507 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSNQ+LI V Sbjct: 145 SSNQFLIYV 153>XP_006715505 Length = 1673 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSNQ+LI V Sbjct: 145 SSNQFLIYV 153>XP_006715504 Length = 1683 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSNQ+LI V Sbjct: 145 SSNQFLIYV 153>XP_006715503 Length = 1707 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSNQ+LI V Sbjct: 145 SSNQFLIYV 153>XP_006715502 Length = 1707 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSNQYLIQV 9 SSNQ+LI V Sbjct: 145 SSNQFLIYV 153>XP_005270863 Length = 391 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>XP_005270862 Length = 431 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>XP_006710667 Length = 446 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>XP_006710666 Length = 446 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>NP_001139108 Length = 440 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 SSN+YLI+ Sbjct: 91 SSNRYLIE 98>NP_733936 Length = 548 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SNQYLIQ 8 SNQ+L+Q Sbjct: 356 SNQFLVQ 362>NP_001071 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SNQYLIQ 8 SNQ+L+Q Sbjct: 343 SNQFLVQ 349>NP_950245 Length = 384 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SNQYLIQV 9 +NQY IQV Sbjct: 329 ANQYSIQV 336>NP_001243057 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SNQYLIQV 9 +NQY IQV Sbjct: 280 ANQYSIQV 287>NP_001243056 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SNQYLIQV 9 +NQY IQV Sbjct: 280 ANQYSIQV 287>NP_001121683 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SNQYLIQV 9 SNQYL V Sbjct: 409 SNQYLFSV 416>NP_116258 Length = 583 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SNQYLIQV 9 SNQYL V Sbjct: 438 SNQYLFSV 445>XP_006716736 Length = 496 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SNQYLIQV 9 SNQYL V Sbjct: 351 SNQYLFSV 358>NP_061028 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NQYLIQV 9 N YL+QV Sbjct: 266 NSYLVQV 272>NP_065795 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN YLI+ Sbjct: 18 SSNPYLIR 25>NP_001190187 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN YLI+ Sbjct: 18 SSNPYLIR 25>NP_056178 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YLIQ Sbjct: 476 SRNSYLIQ 483>NP_001139799 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YLIQ Sbjct: 476 SRNSYLIQ 483>NP_001139798 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YLIQ Sbjct: 476 SRNSYLIQ 483>NP_004680 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN YLI+ Sbjct: 18 SSNPYLIR 25>NP_542172 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SNQYLI 7 SNQYL+ Sbjct: 272 SNQYLV 277>XP_005264515 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN YLI+ Sbjct: 18 SSNPYLIR 25>XP_005264513 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN YLI+ Sbjct: 18 SSNPYLIR 25>NP_848519 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 NQY++Q+ Sbjct: 74 NQYVVQL 80>NP_001164111 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 NQY++Q+ Sbjct: 61 NQYVVQL 67>NP_036251 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 NQY++Q+ Sbjct: 61 NQYVVQL 67>NP_001138890 Length = 2481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN+YL + Sbjct: 1441 SSNEYLYE 1448>NP_001164110 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 NQY++Q+ Sbjct: 61 NQYVVQL 67>NP_001034892 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 NQY++Q+ Sbjct: 61 NQYVVQL 67>NP_036221 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 + N+YL+Q Sbjct: 666 AENEYLVQ 673>NP_001264880 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001264876 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001264878 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_783163 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 +SN+YL++ Sbjct: 18 ASNKYLVE 25>NP_037423 Length = 1443 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 N+Y++QV Sbjct: 615 NRYIVQV 621>NP_001099022 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001099021 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001099020 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001099019 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001268366 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 +SN+YL++ Sbjct: 18 ASNKYLVE 25>NP_004730 Length = 668 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN YL++ Sbjct: 18 SSNPYLVR 25>NP_001264881 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001264877 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001264875 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_060770 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_001268367 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 +SN+YL++ Sbjct: 18 ASNKYLVE 25>NP_001264874 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSNQYLIQ 8 S N YL+Q Sbjct: 243 SRNSYLVQ 250>NP_008933 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 +SN+YL++ Sbjct: 18 ASNKYLVE 25>XP_006724234 Length = 2363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN+YL + Sbjct: 1323 SSNEYLYE 1330>XP_005261462 Length = 2473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 SSN+YL + Sbjct: 1441 SSNEYLYE 1448>XP_005260314 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 SSNQYLIQ 8 +SN+YL++ Sbjct: 18 ASNKYLVE 25>XP_005251917 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 NQY++Q+ Sbjct: 61 NQYVVQL 67>XP_006716612 Length = 1365 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 N+Y++QV Sbjct: 537 NRYIVQV 543>XP_006716611 Length = 1440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NQYLIQV 9 N+Y++QV Sbjct: 615 NRYIVQV 621>XP_006711818 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 + N+YL+Q Sbjct: 487 AENEYLVQ 494>XP_006711817 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 SSNQYLIQ 8 + N+YL+Q Sbjct: 487 AENEYLVQ 494Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.122 0.298 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 451,251 Number of extensions: 769 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |