Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_694543 18 1135 NP_004110 18 1482 NP_004447 17 3301 NP_001190176 17 3301 XP_006715950 17 3301 XP_006715946 17 3301 XP_005250019 17 3301 NP_001140 16 7355 NP_001191332 16 7355 NP_001191333 16 7355 NP_066267 16 7355 NP_001135918 16 7355 NP_065208 16 7355 XP_006717897 16 7355 XP_006717896 16 7355 XP_005269773 16 7355 XP_006717866 16 7355 XP_005269772 16 7355 XP_006717865 16 7355 XP_006717864 16 7355 XP_006717863 16 7355 XP_006717862 16 7355 XP_006717861 16 7355 XP_006717860 16 7355 XP_006717859 16 7355 XP_006717858 16 7355 XP_006717857 16 7355 XP_006717856 16 7355 XP_006717855 16 7355 XP_006717854 16 7355 XP_006717853 16 7355 XP_006717852 16 7355 XP_006717851 16 7355 XP_006717850 16 7355 XP_006717849 16 7355 XP_006717848 16 7355 XP_006717847 16 7355 XP_006717846 16 7355 XP_006717845 16 7355 XP_005273533 16 7355 NP_065210 16 7355 NP_065209 16 7355 NP_000028 16 7355 NP_001254505 15 9605 NP_694942 15 9605 NP_543140 15 9605 NP_001004696 15 9605>NP_694543 Length = 707 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 SSMRGSREV 9 SS+RG+REV Sbjct: 75 SSLRGTREV 83>NP_004110 Length = 993 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSMRGSREV 9 SSM GSREV Sbjct: 735 SSMPGSREV 743>NP_004447 Length = 751 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSMRGSRE 8 SS+RG+RE Sbjct: 75 SSLRGTRE 82>NP_001190176 Length = 746 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSMRGSRE 8 SS+RG+RE Sbjct: 75 SSLRGTRE 82>XP_006715950 Length = 712 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSMRGSRE 8 SS+RG+RE Sbjct: 83 SSLRGTRE 90>XP_006715946 Length = 746 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSMRGSRE 8 SS+RG+RE Sbjct: 75 SSLRGTRE 82>XP_005250019 Length = 754 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSMRGSRE 8 SS+RG+RE Sbjct: 83 SSLRGTRE 90>NP_001140 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 130 SMRGSR 135>NP_001191332 Length = 1861 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 990 SMRGSR 995>NP_001191333 Length = 1868 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 997 SMRGSR 1002>NP_066267 Length = 4377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 996 SMRGSR 1001>NP_001135918 Length = 1897 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 966 SMRGSR 971>NP_065208 Length = 1856 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 925 SMRGSR 930>XP_006717897 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSMRGSREV 9 + M GSRE+ Sbjct: 2 NKMEGSREI 10>XP_006717896 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 SSMRGSREV 9 + M GSRE+ Sbjct: 28 NKMEGSREI 36>XP_005269773 Length = 1867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 996 SMRGSR 1001>XP_006717866 Length = 1877 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1014 SMRGSR 1019>XP_005269772 Length = 1885 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1014 SMRGSR 1019>XP_006717865 Length = 1898 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717864 Length = 1924 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717863 Length = 1972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717862 Length = 1981 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717861 Length = 1984 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717860 Length = 1993 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717859 Length = 2758 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717858 Length = 2775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717857 Length = 2794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717856 Length = 2833 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717855 Length = 2837 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717854 Length = 2852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717853 Length = 2854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1018 SMRGSR 1023>XP_006717852 Length = 3508 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 125 SMRGSR 130>XP_006717851 Length = 3513 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 130 SMRGSR 135>XP_006717850 Length = 4364 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 981 SMRGSR 986>XP_006717849 Length = 4383 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1000 SMRGSR 1005>XP_006717848 Length = 4392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1009 SMRGSR 1014>XP_006717847 Length = 4395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1012 SMRGSR 1017>XP_006717846 Length = 4396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1013 SMRGSR 1018>XP_006717845 Length = 4397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 1014 SMRGSR 1019>XP_005273533 Length = 1921 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 966 SMRGSR 971>NP_065210 Length = 1719 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 925 SMRGSR 930>NP_065209 Length = 1881 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 925 SMRGSR 930>NP_000028 Length = 1880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SMRGSR 7 SMRGSR Sbjct: 925 SMRGSR 930>NP_001254505 Length = 1118 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSMRGS 6 SSMRGS Sbjct: 715 SSMRGS 720>NP_694942 Length = 1123 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSMRGS 6 SSMRGS Sbjct: 720 SSMRGS 725>NP_543140 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MRGSREV 9 +RGSR+V Sbjct: 114 LRGSRDV 120>NP_001004696 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RGSREV 9 RGSRE+ Sbjct: 201 RGSREI 206Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.114 0.271 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 477,705 Number of extensions: 495 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |