Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 22 103 XP_005271621 22 103 XP_006718907 22 103 XP_006718906 22 103 XP_005271619 22 103 XP_005271618 22 103 NP_004708 17 3301 XP_006716236 17 3301 XP_006716235 17 3301 NP_001278327 17 4312 NP_001005751 17 4312 NP_001162578 17 4312 XP_006717895 17 4312 XP_005269865 17 4312 XP_006717894 17 4312 XP_005269864 17 4312 XP_005269863 17 4312 NP_001162577 17 4312 NP_056077 17 4312 NP_037513 16 5631 NP_002323 16 7355 NP_446464 16 7355 NP_001002814 16 7355 NP_000041 16 7355 NP_079427 16 7355 XP_006718581 16 7355 XP_005273986 16 7355 XP_006718580 16 7355 XP_005273985 16 7355 XP_005273983 16 7355 XP_006718579 16 7355 XP_005273982 16 7355 XP_005272257 16 7355 XP_005272256 16 7355 NP_001025030 16 7355 NP_008995 15 9605 NP_001019831 15 9605 NP_066012 15 9605 NP_001018098 15 9605 NP_060154 15 9605 NP_060550 15 9605 NP_065872 15 9605 NP_056150 15 9605 NP_001036171 15 9605 NP_001036170 15 9605 NP_115598 15 9605 NP_001184043 15 9605 NP_001184042 15 9605 XP_006719370 15 9605 XP_006719369 15 9605 XP_006719368 15 9605 XP_005267190 15 9605 XP_005267189 15 9605 XP_005267187 15 9605 XP_005267185 15 9605 XP_005267184 15 9605 XP_005263223 15 9605 XP_006714268 15 9605 XP_006714266 15 9605 XP_006714265 15 9605 XP_006714264 15 9605 XP_006714263 15 9605 XP_006714262 15 9605 XP_006713877 15 9605 XP_006713876 15 9605 XP_006713875 15 9605 XP_006713874 15 9605 XP_006713873 15 9605 NP_001184029 15 9605 NP_009055 15 9605>NP_000042 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSMNVFNDY 9 SSMN+FNDY Sbjct: 853 SSMNLFNDY 861>XP_005271621 Length = 2708 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSMNVFNDY 9 SSMN+FNDY Sbjct: 505 SSMNLFNDY 513>XP_006718907 Length = 3050 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSMNVFNDY 9 SSMN+FNDY Sbjct: 853 SSMNLFNDY 861>XP_006718906 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSMNVFNDY 9 SSMN+FNDY Sbjct: 853 SSMNLFNDY 861>XP_005271619 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSMNVFNDY 9 SSMN+FNDY Sbjct: 853 SSMNLFNDY 861>XP_005271618 Length = 3056 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSMNVFNDY 9 SSMN+FNDY Sbjct: 853 SSMNLFNDY 861>NP_004708 Length = 1065 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MNVFNDY 9 +NVFN+Y Sbjct: 524 LNVFNNY 530>XP_006716236 Length = 1022 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MNVFNDY 9 +NVFN+Y Sbjct: 489 LNVFNNY 495>XP_006716235 Length = 1057 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MNVFNDY 9 +NVFN+Y Sbjct: 524 LNVFNNY 530>NP_001278327 Length = 1320 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 81 NVFNDF 86>NP_001005751 Length = 1341 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 81 NVFNDF 86>NP_001162578 Length = 1245 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 81 NVFNDF 86>XP_006717895 Length = 1297 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 133 NVFNDF 138>XP_005269865 Length = 1331 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 133 NVFNDF 138>XP_006717894 Length = 1342 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 133 NVFNDF 138>XP_005269864 Length = 1364 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 133 NVFNDF 138>XP_005269863 Length = 1369 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 133 NVFNDF 138>NP_001162577 Length = 1279 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 81 NVFNDF 86>NP_056077 Length = 1320 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 NVFND+ Sbjct: 81 NVFNDF 86>NP_037513 Length = 1024 Score = 16.2 bits (30), Expect = 5631 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 NVFNDY 9 N+FN+Y Sbjct: 775 NIFNEY 780>NP_002323 Length = 4544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SMNVFNDY 9 S++VF DY Sbjct: 4094 SIDVFEDY 4101>NP_446464 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SMNVFNDY 9 SMNV DY Sbjct: 376 SMNVQGDY 383>NP_001002814 Length = 1283 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSMNVFND 8 SS+N+F D Sbjct: 500 SSLNLFED 507>NP_000041 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SMNVFNDY 9 SMNV DY Sbjct: 376 SMNVQGDY 383>NP_079427 Length = 649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSMNVFND 8 SS+N+F D Sbjct: 500 SSLNLFED 507>XP_006718581 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSMNVFN 7 SSM VFN Sbjct: 139 SSMEVFN 145>XP_005273986 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSMNVFN 7 SSM VFN Sbjct: 139 SSMEVFN 145>XP_006718580 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSMNVFN 7 SSM VFN Sbjct: 139 SSMEVFN 145>XP_005273985 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSMNVFN 7 SSM VFN Sbjct: 139 SSMEVFN 145>XP_005273983 Length = 277 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSMNVFN 7 SSM VFN Sbjct: 156 SSMEVFN 162>XP_006718579 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSMNVFN 7 SSM VFN Sbjct: 175 SSMEVFN 181>XP_005273982 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSMNVFN 7 SSM VFN Sbjct: 208 SSMEVFN 214>XP_005272257 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SMNVFNDY 9 SMNV DY Sbjct: 376 SMNVQGDY 383>XP_005272256 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SMNVFNDY 9 SMNV DY Sbjct: 408 SMNVQGDY 415>NP_001025030 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 SSMNVFN 7 SSM VFN Sbjct: 139 SSMEVFN 145>NP_008995 Length = 1289 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSMNVFNDY 9 SSM V DY Sbjct: 627 SSMAVIKDY 635>NP_001019831 Length = 2986 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSMNVFNDY 9 SSM V DY Sbjct: 2324 SSMAVIKDY 2332>NP_066012 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SMNVFNDY 9 S+N NDY Sbjct: 112 SLNPHNDY 119>NP_001018098 Length = 3628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSMNVFND 8 S +NVFN+ Sbjct: 2394 SCLNVFNN 2401>NP_060154 Length = 3710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSMNVFND 8 S +NVFN+ Sbjct: 2351 SCLNVFNN 2358>NP_060550 Length = 3585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSMNVFND 8 S +NVFN+ Sbjct: 2351 SCLNVFNN 2358>NP_065872 Length = 3753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SSMNVFND 8 S +NVFN+ Sbjct: 2394 SCLNVFNN 2401>NP_056150 Length = 2210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSMNVFND 8 S MN+F D Sbjct: 1118 SVMNIFKD 1125>NP_001036171 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 SMN F+D Sbjct: 87 SMNTFSD 93>NP_001036170 Length = 159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 SMN F+D Sbjct: 87 SMNTFSD 93>NP_115598 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 NVFND 8 NVFND Sbjct: 617 NVFND 621>NP_001184043 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 SMN F+D Sbjct: 60 SMNTFSD 66>NP_001184042 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 SMN F+D Sbjct: 87 SMNTFSD 93>XP_006719370 Length = 2076 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSMNVFND 8 S MN+F D Sbjct: 984 SVMNIFKD 991>XP_006719369 Length = 2200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSMNVFND 8 S MN+F D Sbjct: 1108 SVMNIFKD 1115>XP_006719368 Length = 2209 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 SSMNVFND 8 S MN+F D Sbjct: 1117 SVMNIFKD 1124>XP_005267190 Length = 3424 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 S+NV ND Sbjct: 924 SLNVLND 930>XP_005267189 Length = 3425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 S+NV ND Sbjct: 938 SLNVLND 944>XP_005267187 Length = 3433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 S+NV ND Sbjct: 933 SLNVLND 939>XP_005267185 Length = 3437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 S+NV ND Sbjct: 937 SLNVLND 943>XP_005267184 Length = 3438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 S+NV ND Sbjct: 938 SLNVLND 944>XP_005263223 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SMNVFNDY 9 S+N NDY Sbjct: 112 SLNPHNDY 119>XP_006714268 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 NVFND 8 NVFND Sbjct: 1040 NVFND 1044>XP_006714266 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 NVFND 8 NVFND Sbjct: 1087 NVFND 1091>XP_006714265 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 NVFND 8 NVFND Sbjct: 1091 NVFND 1095>XP_006714264 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 NVFND 8 NVFND Sbjct: 1091 NVFND 1095>XP_006714263 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 NVFND 8 NVFND Sbjct: 1091 NVFND 1095>XP_006714262 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 NVFND 8 NVFND Sbjct: 1091 NVFND 1095>XP_006713877 Length = 2956 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSMNVFNDY 9 SSM V DY Sbjct: 2294 SSMAVIKDY 2302>XP_006713876 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSMNVFNDY 9 SSM V DY Sbjct: 2304 SSMAVIKDY 2312>XP_006713875 Length = 2975 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSMNVFNDY 9 SSM V DY Sbjct: 2313 SSMAVIKDY 2321>XP_006713874 Length = 2979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSMNVFNDY 9 SSM V DY Sbjct: 2317 SSMAVIKDY 2325>XP_006713873 Length = 2988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 SSMNVFNDY 9 SSM V DY Sbjct: 2326 SSMAVIKDY 2334>NP_001184029 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 SMN F+D Sbjct: 60 SMNTFSD 66>NP_009055 Length = 3433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 SMNVFND 8 S+NV ND Sbjct: 933 SLNVLND 939Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.125 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,232 Number of extensions: 667 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |