Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1935 NP_001005855 18 1935 XP_006716142 18 1935 XP_005250088 18 1935 XP_006716141 18 1935 XP_005250085 18 1935 XP_006716140 18 1935 XP_005250084 18 1935 XP_005250083 18 1935 XP_005250082 18 1935 NP_001231892 16 5631 NP_001104488 16 5631 NP_660093 16 5631 NP_892009 16 5631 XP_006718429 16 5631 XP_006718428 16 5631 XP_006718427 16 5631 NP_057567 16 7355 NP_001265150 16 7355 NP_006461 16 7355 XP_006721525 16 7355 XP_005256537 16 7355 XP_005256536 16 7355 XP_005265284 16 7355 XP_005265283 16 7355 XP_005265282 16 7355 NP_005227 15 9605 NP_005069 15 9605 NP_065959 15 9605 NP_001269910 15 9605 NP_001269909 15 9605 NP_001098662 15 9605 NP_001269908 15 9605 NP_001269911 15 9605 NP_005640 15 9605 NP_149990 15 9605 NP_001073873 15 9605 NP_001191149 15 9605 XP_005254690 15 9605 XP_006720728 15 9605 XP_006720727 15 9605 XP_005254679 15 9605 XP_005254685 15 9605 XP_006720726 15 9605 XP_005254682 15 9605 XP_006720725 15 9605 XP_005254680 15 9605>NP_733751 Length = 4911 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2919 SSLLANEKS 2927>NP_001005855 Length = 387 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SLRANEKS 9 SLR+NEKS Sbjct: 372 SLRSNEKS 379>XP_006716142 Length = 4927 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2936 SSLLANEKS 2944>XP_005250088 Length = 4928 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2936 SSLLANEKS 2944>XP_006716141 Length = 4959 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2936 SSLLANEKS 2944>XP_005250085 Length = 4979 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2936 SSLLANEKS 2944>XP_006716140 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2936 SSLLANEKS 2944>XP_005250084 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2936 SSLLANEKS 2944>XP_005250083 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2935 SSLLANEKS 2943>XP_005250082 Length = 4983 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL ANEKS Sbjct: 2936 SSLLANEKS 2944>NP_001231892 Length = 2488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSL+ NEK Sbjct: 503 SSLKGNEK 510>NP_001104488 Length = 2365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSL+ NEK Sbjct: 416 SSLKGNEK 423>NP_660093 Length = 2429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSL+ NEK Sbjct: 480 SSLKGNEK 487>NP_892009 Length = 2432 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSL+ NEK Sbjct: 480 SSLKGNEK 487>XP_006718429 Length = 2416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSL+ NEK Sbjct: 431 SSLKGNEK 438>XP_006718428 Length = 2455 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSL+ NEK Sbjct: 503 SSLKGNEK 510>XP_006718427 Length = 2465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSL+ NEK Sbjct: 480 SSLKGNEK 487>NP_057567 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSLR+N K Sbjct: 286 SSLRSNSK 293>NP_001265150 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSLR+N K Sbjct: 247 SSLRSNSK 254>NP_006461 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 S L+AN+KS Sbjct: 195 SRLQANQKS 203>XP_006721525 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 S L+AN+KS Sbjct: 81 SRLQANQKS 89>XP_005256537 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 S L+AN+KS Sbjct: 33 SRLQANQKS 41>XP_005256536 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 S L+AN+KS Sbjct: 81 SRLQANQKS 89>XP_005265284 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSLR+N K Sbjct: 247 SSLRSNSK 254>XP_005265283 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSLR+N K Sbjct: 286 SSLRSNSK 293>XP_005265282 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSLRANEK 8 SSLR+N K Sbjct: 286 SSLRSNSK 293>NP_005227 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLRANEKS 9 SLRA EK+ Sbjct: 312 SLRATEKA 319>NP_005069 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 207 SLRASEK 213>NP_065959 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 207 SLRASEK 213>NP_001269910 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 200 SLRASEK 206>NP_001269909 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 207 SLRASEK 213>NP_001098662 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 207 SLRASEK 213>NP_001269908 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 207 SLRASEK 213>NP_001269911 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 151 SLRASEK 157>NP_005640 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSLR +EK+ Sbjct: 227 SSLRKHEKN 235>NP_149990 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSLR +E+S Sbjct: 238 SSLRQHERS 246>NP_001073873 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSL+ +EKS Sbjct: 240 SSLKRHEKS 248>NP_001191149 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSLRANEKS 9 SSLR +E+S Sbjct: 237 SSLRQHERS 245>XP_005254690 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 207 SLRASEK 213>XP_006720728 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 206 SLRASEK 212>XP_006720727 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 212 SLRASEK 218>XP_005254679 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 217 SLRASEK 223>XP_005254685 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 217 SLRASEK 223>XP_006720726 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 206 SLRASEK 212>XP_005254682 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 217 SLRASEK 223>XP_006720725 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 212 SLRASEK 218>XP_005254680 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRANEK 8 SLRA+EK Sbjct: 217 SLRASEK 223Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.282 0.0971 0.209 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 373,374 Number of extensions: 460 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |