Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 18 1482 NP_001120972 18 1482 XP_006716052 18 1482 XP_006716051 18 1482 NP_001907 17 2528 NP_001153605 17 3301 NP_062816 17 3301 NP_001153606 17 3301 NP_001153602 17 3301 NP_001153604 17 3301 NP_997544 17 3301 NP_997543 17 3301 XP_005268128 17 3301 XP_005268127 17 3301 XP_005268126 17 3301 XP_005268125 17 3301 XP_005268124 17 3301 NP_079100 17 3301 NP_001153576 17 3301 NP_001153575 17 3301 NP_060899 17 4312 XP_006725524 17 4312 XP_006725523 17 4312 XP_005276828 17 4312 XP_006726279 17 4312 XP_006714722 17 4312 XP_006714721 17 4312 NP_872293 16 5631 XP_005251817 16 5631 XP_005251816 16 5631 XP_006717052 16 5631 NP_063946 16 7355 NP_001137446 16 7355 NP_001269424 16 7355 NP_001269427 16 7355 NP_001269426 16 7355 NP_001269425 16 7355 NP_002283 16 7355 NP_077301 16 7355 XP_006723688 16 7355 XP_005270117 16 7355 XP_005270116 16 7355 XP_005265184 16 7355 NP_001273206 15 9605 NP_001135906 15 9605 NP_036347 15 9605 NP_001273207 15 9605 NP_001273208 15 9605 NP_006313 15 9605 NP_004835 15 9605 NP_001018009 15 9605 XP_006723533 15 9605 XP_006723532 15 9605 XP_006723531 15 9605 XP_005259458 15 9605 XP_005268350 15 9605 XP_006713483 15 9605 NP_612383 15 9605>NP_000236 Length = 1390 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 SSKANLS G Sbjct: 102 SSKANLSGG 110>NP_001120972 Length = 1408 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 SSKANLS G Sbjct: 102 SSKANLSGG 110>XP_006716052 Length = 1409 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 SSKANLS G Sbjct: 121 SSKANLSGG 129>XP_006716051 Length = 1427 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 SSKANLS G Sbjct: 121 SSKANLSGG 129>NP_001907 Length = 325 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 SSK+ LSRG Sbjct: 48 SSKSGLSRG 56>NP_001153605 Length = 951 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+ AN+SRG Sbjct: 698 STSANISRG 706>NP_062816 Length = 932 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+ AN+SRG Sbjct: 679 STSANISRG 687>NP_001153606 Length = 822 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+ AN+SRG Sbjct: 569 STSANISRG 577>NP_001153602 Length = 923 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+ AN+SRG Sbjct: 670 STSANISRG 678>NP_001153604 Length = 942 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+ AN+SRG Sbjct: 689 STSANISRG 697>NP_997544 Length = 571 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 63 SNKSNFSRG 71>NP_997543 Length = 579 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>XP_005268128 Length = 580 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>XP_005268127 Length = 604 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>XP_005268126 Length = 605 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>XP_005268125 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>XP_005268124 Length = 731 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>NP_079100 Length = 736 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>NP_001153576 Length = 730 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>NP_001153575 Length = 735 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSKANLSRG 9 S+K+N SRG Sbjct: 97 SNKSNFSRG 105>NP_060899 Length = 2624 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSKANLSR 8 SSKA+LSR Sbjct: 2492 SSKASLSR 2499>XP_006725524 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSKANLSR 8 SSKA+LSR Sbjct: 2492 SSKASLSR 2499>XP_006725523 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSKANLSR 8 SSKA+LSR Sbjct: 2491 SSKASLSR 2498>XP_005276828 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSKANLSR 8 SSKA+LSR Sbjct: 2492 SSKASLSR 2499>XP_006726279 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSKANLSR 8 SSKA+LSR Sbjct: 2491 SSKASLSR 2498>XP_006714722 Length = 2584 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSKANLSR 8 SSKA+LSR Sbjct: 2492 SSKASLSR 2499>XP_006714721 Length = 2623 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSKANLSR 8 SSKA+LSR Sbjct: 2491 SSKASLSR 2498>NP_872293 Length = 652 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S KANLSR Sbjct: 155 SIKANLSR 162>XP_005251817 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S KANLSR Sbjct: 155 SIKANLSR 162>XP_005251816 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S KANLSR Sbjct: 116 SIKANLSR 123>XP_006717052 Length = 616 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S KANLSR Sbjct: 119 SIKANLSR 126>NP_063946 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ANLSRG 9 ANLSRG Sbjct: 623 ANLSRG 628>NP_001137446 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ANLSRG 9 ANLSRG Sbjct: 588 ANLSRG 593>NP_001269424 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S K+NLSR Sbjct: 307 SQKSNLSR 314>NP_001269427 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S K+NLSR Sbjct: 217 SQKSNLSR 224>NP_001269426 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S K+NLSR Sbjct: 348 SQKSNLSR 355>NP_001269425 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S K+NLSR Sbjct: 307 SQKSNLSR 314>NP_002283 Length = 1798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KANLSRG 9 KAN SRG Sbjct: 1497 KANASRG 1503>NP_077301 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S K+NLSR Sbjct: 307 SQKSNLSR 314>XP_006723688 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSKANLSR 8 S K+NLSR Sbjct: 307 SQKSNLSR 314>XP_005270117 Length = 160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ANLSRG 9 ANLSRG Sbjct: 3 ANLSRG 8>XP_005270116 Length = 160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ANLSRG 9 ANLSRG Sbjct: 3 ANLSRG 8>XP_005265184 Length = 1798 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KANLSRG 9 KAN SRG Sbjct: 1497 KANASRG 1503>NP_001273206 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 270 KANLSR 275>NP_001135906 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSKANLSRG 9 S KAN SRG Sbjct: 814 SLKANGSRG 822>NP_036347 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSKANLSRG 9 S KAN SRG Sbjct: 867 SLKANGSRG 875>NP_001273207 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 280 KANLSR 285>NP_001273208 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 280 KANLSR 285>NP_006313 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 280 KANLSR 285>NP_004835 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSKANLSRG 9 S KAN +RG Sbjct: 395 SDKANNNRG 403>NP_001018009 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSKANLSRG 9 S KAN +RG Sbjct: 238 SDKANNNRG 246>XP_006723533 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 871 KANLSR 876>XP_006723532 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 675 KANLSR 680>XP_006723531 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 815 KANLSR 820>XP_005259458 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 871 KANLSR 876>XP_005268350 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 280 KANLSR 285>XP_006713483 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSKANLSRG 9 S KAN +RG Sbjct: 238 SDKANNNRG 246>NP_612383 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KANLSR 8 KANLSR Sbjct: 871 KANLSR 876Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.292 0.107 0.253 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 326,862 Number of extensions: 360 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |