Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1135 XP_006716142 18 1135 XP_005250088 18 1135 XP_006716141 18 1135 XP_005250085 18 1135 XP_006716140 18 1135 XP_005250084 18 1135 XP_005250083 18 1135 XP_005250082 18 1135 NP_009106 17 3301 NP_008841 17 3301 NP_061173 17 3301 XP_005255519 17 3301 XP_005255518 17 3301 XP_006716343 17 3301 XP_005273449 17 3301 XP_005273448 17 3301 NP_001273376 16 5631 NP_055537 16 5631 NP_001273375 16 5631 NP_001273374 16 5631 NP_006538 16 5631 NP_056948 16 5631 XP_006715702 16 5631 XP_006715701 16 5631 XP_006715344 16 5631 XP_006715343 16 5631 XP_006715342 16 5631 XP_006715341 16 5631 XP_006715340 16 5631 XP_006715339 16 5631 XP_006715338 16 5631 XP_005259704 16 7355 XP_005248008 16 7355 XP_006713927 16 7355 NP_660334 16 7355 NP_079243 16 7355 NP_065816 15 9605 NP_001139661 15 9605 NP_001166246 15 9605 NP_690004 15 9605 NP_001139662 15 9605 NP_006032 15 9605 NP_005344 15 9605 NP_060227 15 9605 XP_006722564 15 9605 XP_006722563 15 9605 XP_005266783 15 9605 XP_005266713 15 9605 XP_006710573 15 9605 XP_006710572 15 9605 XP_006710571 15 9605 XP_006710570 15 9605 XP_006710569 15 9605 XP_006710568 15 9605 XP_006710567 15 9605 XP_006710566 15 9605 XP_005245859 15 9605 NP_055728 15 9605>NP_733751 Length = 4911 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1307 SSGSISEQL 1315>XP_006716142 Length = 4927 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1308 SSGSISEQL 1316>XP_005250088 Length = 4928 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1308 SSGSISEQL 1316>XP_006716141 Length = 4959 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1308 SSGSISEQL 1316>XP_005250085 Length = 4979 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1308 SSGSISEQL 1316>XP_006716140 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1308 SSGSISEQL 1316>XP_005250084 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1308 SSGSISEQL 1316>XP_005250083 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1307 SSGSISEQL 1315>XP_005250082 Length = 4983 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSGSISKQL 9 SSGSIS+QL Sbjct: 1308 SSGSISEQL 1316>NP_009106 Length = 339 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGSISKQ 8 S+GS+SKQ Sbjct: 308 SAGSVSKQ 315>NP_008841 Length = 1792 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 SSG+ISK L Sbjct: 1657 SSGNISKDL 1665>NP_061173 Length = 1758 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 SSG+ISK L Sbjct: 1623 SSGNISKDL 1631>XP_005255519 Length = 1796 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 SSG+ISK L Sbjct: 1661 SSGNISKDL 1669>XP_005255518 Length = 1830 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 SSG+ISK L Sbjct: 1695 SSGNISKDL 1703>XP_006716343 Length = 257 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGSISKQ 8 S+GS+SKQ Sbjct: 226 SAGSVSKQ 233>XP_005273449 Length = 339 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGSISKQ 8 S+GS+SKQ Sbjct: 308 SAGSVSKQ 315>XP_005273448 Length = 451 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGSISKQ 8 S+GS+SKQ Sbjct: 420 SAGSVSKQ 427>NP_001273376 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 509 SEGNITKQL 517>NP_055537 Length = 1068 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 559 SEGNITKQL 567>NP_001273375 Length = 647 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 543 SEGNITKQL 551>NP_001273374 Length = 1047 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 538 SEGNITKQL 546>NP_006538 Length = 579 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGSISKQ 8 S GS+SKQ Sbjct: 184 SPGSVSKQ 191>NP_056948 Length = 591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 509 SEGNITKQL 517>XP_006715702 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGSISKQ 8 S GS+SKQ Sbjct: 27 SPGSVSKQ 34>XP_006715701 Length = 527 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGSISKQ 8 S GS+SKQ Sbjct: 184 SPGSVSKQ 191>XP_006715344 Length = 625 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 543 SEGNITKQL 551>XP_006715343 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 509 SEGNITKQL 517>XP_006715342 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 509 SEGNITKQL 517>XP_006715341 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 509 SEGNITKQL 517>XP_006715340 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 509 SEGNITKQL 517>XP_006715339 Length = 1030 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 521 SEGNITKQL 529>XP_006715338 Length = 1052 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 S G+I+KQL Sbjct: 543 SEGNITKQL 551>XP_005259704 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGSISKQ 8 +SGSIS+Q Sbjct: 51 ASGSISQQ 58>XP_005248008 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGSISKQ 8 S+G ISKQ Sbjct: 186 SAGEISKQ 193>XP_006713927 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGSISKQ 8 S+G ISKQ Sbjct: 186 SAGEISKQ 193>NP_660334 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGSISKQ 8 S+G ISKQ Sbjct: 186 SAGEISKQ 193>NP_079243 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGSISKQ 8 +SGSIS+Q Sbjct: 51 ASGSISQQ 58>NP_065816 Length = 5183 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>NP_001139661 Length = 1815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSISKQ 8 GSISKQ Sbjct: 332 GSISKQ 337>NP_001166246 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SSGSISKQ 8 +SGS+S+Q Sbjct: 51 ASGSVSQQ 58>NP_690004 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SSGSISKQ 8 +SGS+S+Q Sbjct: 51 ASGSVSQQ 58>NP_001139662 Length = 1660 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSISKQ 8 GSISKQ Sbjct: 332 GSISKQ 337>NP_006032 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SGSISKQL 9 SGS SKQL Sbjct: 130 SGSGSKQL 137>NP_005344 Length = 1161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GSISKQL 9 GSI KQL Sbjct: 322 GSIQKQL 328>NP_060227 Length = 2248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSISKQ 8 GSISKQ Sbjct: 332 GSISKQ 337>XP_006722564 Length = 1628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSISKQ 8 GSISKQ Sbjct: 332 GSISKQ 337>XP_006722563 Length = 1630 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSISKQ 8 GSISKQ Sbjct: 332 GSISKQ 337>XP_005266783 Length = 2248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GSISKQ 8 GSISKQ Sbjct: 332 GSISKQ 337>XP_005266713 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 +SGSI +QL Sbjct: 594 TSGSILRQL 602>XP_006710573 Length = 5177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>XP_006710572 Length = 5188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>XP_006710571 Length = 5194 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>XP_006710570 Length = 5195 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>XP_006710569 Length = 5212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>XP_006710568 Length = 5221 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>XP_006710567 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>XP_006710566 Length = 5222 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>XP_005245859 Length = 5223 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSGSISKQL 9 SSGS+S L Sbjct: 1982 SSGSVSDHL 1990>NP_055728 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SSGSISKQL 9 +SGSI +QL Sbjct: 594 TSGSILRQL 602Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.107 0.234 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 499,958 Number of extensions: 859 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |