Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065681 18 1482 NP_066124 18 1482 XP_006717999 18 1482 NP_055511 17 2528 NP_001229416 17 2528 NP_001229417 17 2528 NP_055852 17 2528 XP_005277723 17 2528 XP_005270386 17 2528 XP_005269712 17 2528 XP_006717788 17 2528 XP_005269710 17 2528 XP_005269709 17 2528 XP_005269708 17 2528 XP_005269706 17 2528 XP_005269705 17 2528 XP_006718823 17 3301 NP_003914 17 4312 NP_001162 16 5631 XP_005255367 16 5631 XP_006725257 16 5631 XP_006725256 16 5631 NP_443130 16 5631 NP_071882 16 7355 NP_612355 16 7355 NP_003611 16 7355 NP_001275882 16 7355 NP_065191 16 7355 NP_001275884 16 7355 NP_001275880 16 7355 NP_775798 16 7355 NP_056073 16 7355 XP_005267440 16 7355 XP_006717081 16 7355 XP_006715358 16 7355 XP_005264540 16 7355 XP_006712138 16 7355 XP_005264497 16 7355 XP_005264496 16 7355 XP_005263588 16 7355 NP_005261 15 9605 NP_002011 15 9605 NP_891555 15 9605 NP_001140 15 9605 NP_001191332 15 9605 NP_057204 15 9605 NP_001191333 15 9605 NP_003848 15 9605 NP_899196 15 9605 NP_066267 15 9605 NP_006752 15 9605 NP_570971 15 9605 NP_149981 15 9605 NP_006505 15 9605 XP_005276442 15 9605 XP_006725361 15 9605 XP_006723005 15 9605 XP_005260222 15 9605 XP_005256841 15 9605 XP_006720476 15 9605 XP_003846543 15 9605 XP_005269773 15 9605 XP_006717866 15 9605 XP_005269772 15 9605 XP_006717851 15 9605 XP_006717845 15 9605 XP_005265428 15 9605 XP_006712486 15 9605 XP_006712485 15 9605>NP_065681 Length = 1072 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSGARRASL 9 SSGARR SL Sbjct: 689 SSGARRPSL 697>NP_066124 Length = 1114 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSGARRASL 9 SSGARR SL Sbjct: 689 SSGARRPSL 697>XP_006717999 Length = 1207 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SSGARRASL 9 SSGARR SL Sbjct: 782 SSGARRPSL 790>NP_055511 Length = 458 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SGARRASL 9 SGAR+ASL Sbjct: 134 SGARKASL 141>NP_001229416 Length = 1837 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1195 SSGSRRAS 1202>NP_001229417 Length = 1892 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1195 SSGSRRAS 1202>NP_055852 Length = 1842 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1200 SSGSRRAS 1207>XP_005277723 Length = 458 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SGARRASL 9 SGAR+ASL Sbjct: 134 SGARKASL 141>XP_005270386 Length = 482 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SGARRASL 9 SGAR+ASL Sbjct: 158 SGARKASL 165>XP_005269712 Length = 1800 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1166 SSGSRRAS 1173>XP_006717788 Length = 1829 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1195 SSGSRRAS 1202>XP_005269710 Length = 1834 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1200 SSGSRRAS 1207>XP_005269709 Length = 1871 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1166 SSGSRRAS 1173>XP_005269708 Length = 1897 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1200 SSGSRRAS 1207>XP_005269706 Length = 1900 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1195 SSGSRRAS 1202>XP_005269705 Length = 1905 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+RRAS Sbjct: 1200 SSGSRRAS 1207>XP_006718823 Length = 1011 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GARRASL 9 GARRASL Sbjct: 175 GARRASL 181>NP_003914 Length = 365 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 SSG RASL Sbjct: 265 SSGGHRASL 273>NP_001162 Length = 1503 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+R+AS Sbjct: 397 SSGSRKAS 404>XP_005255367 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+R+AS Sbjct: 498 SSGSRKAS 505>XP_006725257 Length = 972 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+R+AS Sbjct: 498 SSGSRKAS 505>XP_006725256 Length = 979 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SSGARRAS 8 SSG+R+AS Sbjct: 498 SSGSRKAS 505>NP_443130 Length = 650 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SSGARRAS 8 SSGA RAS Sbjct: 233 SSGATRAS 240>NP_071882 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 SSG RASL Sbjct: 106 SSGCGRASL 114>NP_612355 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SGARRA+ Sbjct: 38 SGARRAA 44>NP_003611 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SSGARRASL 9 SSGA+ ASL Sbjct: 558 SSGAQPASL 566>NP_001275882 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SG+RRAS Sbjct: 638 SGSRRAS 644>NP_065191 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SG+RRAS Sbjct: 672 SGSRRAS 678>NP_001275884 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SG+RRAS Sbjct: 318 SGSRRAS 324>NP_001275880 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SG+RRAS Sbjct: 696 SGSRRAS 702>NP_775798 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SG+RRAS Sbjct: 21 SGSRRAS 27>NP_056073 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 16 SGGARLASL 24>XP_005267440 Length = 341 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SG+RRAS Sbjct: 21 SGSRRAS 27>XP_006717081 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 16 SGGARLASL 24>XP_006715358 Length = 216 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGARRAS 8 S+G RRAS Sbjct: 62 SAGTRRAS 69>XP_005264540 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 SSG RASL Sbjct: 106 SSGCGRASL 114>XP_006712138 Length = 678 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 SSG RASL Sbjct: 106 SSGCGRASL 114>XP_005264497 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SG+RRAS Sbjct: 672 SGSRRAS 678>XP_005264496 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SG+RRAS Sbjct: 553 SGSRRAS 559>XP_005263588 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARRAS 8 SGARRA+ Sbjct: 38 SGARRAA 44>NP_005261 Length = 1586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 965 GARRAS 970>NP_002011 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 991 GARRAS 996>NP_891555 Length = 1363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 991 GARRAS 996>NP_001140 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 40 SLGARSASL 48>NP_001191332 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 900 SLGARSASL 908>NP_057204 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSGARR 6 SSGARR Sbjct: 505 SSGARR 510>NP_001191333 Length = 1868 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 907 SLGARSASL 915>NP_003848 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGARRA 7 SGARRA Sbjct: 225 SGARRA 230>NP_899196 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSGARR 6 SSGARR Sbjct: 505 SSGARR 510>NP_066267 Length = 4377 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 906 SLGARSASL 914>NP_006752 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 54 GARRAS 59>NP_570971 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 748 GARRAS 753>NP_149981 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSGARR 6 SSGARR Sbjct: 154 SSGARR 159>NP_006505 Length = 1956 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGARRAS 8 +SG RRAS Sbjct: 493 ASGKRRAS 500>XP_005276442 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGARRA 7 SGARRA Sbjct: 118 SGARRA 123>XP_006725361 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 54 GARRAS 59>XP_006723005 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSGARR 6 SSGARR Sbjct: 154 SSGARR 159>XP_005260222 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SSGARR 6 SSGARR Sbjct: 34 SSGARR 39>XP_005256841 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 54 GARRAS 59>XP_006720476 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 755 GARRAS 760>XP_003846543 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SGARRA 7 SGARRA Sbjct: 118 SGARRA 123>XP_005269773 Length = 1867 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 906 SLGARSASL 914>XP_006717866 Length = 1877 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 924 SLGARSASL 932>XP_005269772 Length = 1885 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 924 SLGARSASL 932>XP_006717851 Length = 3513 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 40 SLGARSASL 48>XP_006717845 Length = 4397 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 SSGARRASL 9 S GAR ASL Sbjct: 924 SLGARSASL 932>XP_005265428 Length = 1959 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSGARRAS 8 +SG RRAS Sbjct: 496 ASGKRRAS 503>XP_006712486 Length = 1504 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 883 GARRAS 888>XP_006712485 Length = 1569 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GARRAS 8 GARRAS Sbjct: 948 GARRAS 953Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.111 0.264 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 414,618 Number of extensions: 599 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |