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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001275701                                                           17    3301
NP_004561                                                              17    3301
NP_001275703                                                           17    3301
XP_005253450                                                           17    3301
XP_006719151                                                           17    3301
NP_056142                                                              16    7355
NP_001164268                                                           16    7355
NP_078975                                                              16    7355
NP_001164267                                                           16    7355
XP_005264950                                                           16    7355
XP_006713056                                                           16    7355
XP_005264949                                                           16    7355
XP_005245106                                                           16    7355
NP_001035522                                                           16    7355
NP_006787                                                              15    9605
XP_005274446                                                           15    9605
NP_006840                                                              15    9605

>NP_001275701
          Length = 1486

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SSETSAKVL 9
           SSETSAK L
Sbjct: 470 SSETSAKGL 478



>NP_004561
          Length = 1445

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SSETSAKVL 9
           SSETSAK L
Sbjct: 470 SSETSAKGL 478



>NP_001275703
          Length = 1264

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SSETSAKVL 9
           SSETSAK L
Sbjct: 248 SSETSAKGL 256



>XP_005253450
          Length = 1486

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SSETSAKVL 9
           SSETSAK L
Sbjct: 470 SSETSAKGL 478



>XP_006719151
          Length = 1486

 Score = 16.9 bits (32), Expect =  3301
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   SSETSAKVL 9
           SSETSAK L
Sbjct: 470 SSETSAKGL 478



>NP_056142
          Length = 1016

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  SSETSAKVL 9
          SSE  AKVL
Sbjct: 10 SSEPEAKVL 18



>NP_001164268
          Length = 227

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   SSETSAKV 8
           +SET+AKV
Sbjct: 136 NSETAAKV 143



>NP_078975
          Length = 268

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   SSETSAKV 8
           +SET+AKV
Sbjct: 136 NSETAAKV 143



>NP_001164267
          Length = 261

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   SSETSAKV 8
           +SET+AKV
Sbjct: 136 NSETAAKV 143



>XP_005264950
          Length = 377

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   SSETSAKV 8
           SSE SAKV
Sbjct: 128 SSEDSAKV 135



>XP_006713056
          Length = 384

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   SSETSAKV 8
           SSE SAKV
Sbjct: 128 SSEDSAKV 135



>XP_005264949
          Length = 439

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   SSETSAKV 8
           SSE SAKV
Sbjct: 128 SSEDSAKV 135



>XP_005245106
          Length = 970

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1  SSETSAKVL 9
          SSE  AKVL
Sbjct: 10 SSEPEAKVL 18



>NP_001035522
          Length = 356

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1  SSETSAKV 8
          SSE SAKV
Sbjct: 45 SSEDSAKV 52



>NP_006787
          Length = 797

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   ETSAKVL 9
           ET+AKVL
Sbjct: 293 ETTAKVL 299



>XP_005274446
          Length = 415

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   SSETSAK 7
           SSETSA+
Sbjct: 370 SSETSAR 376



>NP_006840
          Length = 525

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   SSETSAKV 8
           +S+TSAK+
Sbjct: 263 NSQTSAKI 270



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.279   0.0936    0.191 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 232,302
Number of extensions: 203
Number of successful extensions: 17
Number of sequences better than 10000.0: 17
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 17
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 18 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.7 bits)
S2: 28 (15.4 bits)