Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_008835                                                              20     509
NP_001075109                                                           20     509
NP_002290                                                              16    5631
NP_006446                                                              16    5631
NP_001724                                                              16    5631
XP_005257010                                                           16    5631
XP_005257009                                                           16    5631
XP_006721703                                                           16    5631
NP_001268885                                                           16    7355
NP_443128                                                              16    7355
NP_060353                                                              16    7355
NP_001129120                                                           16    7355
NP_443132                                                              16    7355
NP_002835                                                              16    7355
NP_937757                                                              16    7355
NP_937756                                                              16    7355
NP_001159898                                                           16    7355
XP_006725090                                                           16    7355
XP_006725086                                                           16    7355
XP_006725085                                                           16    7355
XP_006725084                                                           16    7355
XP_006725083                                                           16    7355
XP_006725082                                                           16    7355
XP_006724604                                                           16    7355
XP_006724603                                                           16    7355
XP_006724602                                                           16    7355
XP_006718462                                                           16    7355
XP_006715601                                                           16    7355
XP_005267142                                                           16    7355
XP_006715600                                                           16    7355
XP_005267139                                                           16    7355
XP_006715599                                                           16    7355
XP_006715598                                                           16    7355
XP_006710008                                                           16    7355
NP_005561                                                              15    9605
NP_001122108                                                           15    9605
NP_001166217                                                           15    9605
NP_006539                                                              15    9605
NP_001007226                                                           15    9605
NP_060124                                                              15    9605
NP_542785                                                              15    9605
NP_001166216                                                           15    9605
NP_036260                                                              15    9605
NP_006355                                                              15    9605
NP_001139698                                                           15    9605
NP_001139697                                                           15    9605
NP_060212                                                              15    9605
NP_057608                                                              15    9605
NP_116780                                                              15    9605
NP_001276881                                                           15    9605
NP_001276880                                                           15    9605
NP_001008401                                                           15    9605
NP_001180236                                                           15    9605
NP_001182726                                                           15    9605
XP_006722557                                                           15    9605
XP_006722556                                                           15    9605
XP_006721116                                                           15    9605
XP_005255419                                                           15    9605
XP_005255418                                                           15    9605
XP_005267319                                                           15    9605
XP_006715792                                                           15    9605
XP_006715791                                                           15    9605
XP_006715790                                                           15    9605
XP_006715789                                                           15    9605
XP_006715788                                                           15    9605
NP_056179                                                              15    9605
NP_006354                                                              15    9605
NP_116781                                                              15    9605
>NP_008835
          Length = 4128

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    SSESYSFK 8
            SSESYSFK
Sbjct: 3536 SSESYSFK 3543
>NP_001075109
          Length = 4097

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1    SSESYSFK 8
            SSESYSFK
Sbjct: 3536 SSESYSFK 3543
>NP_002290
          Length = 1927

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   ESYSFKG 9
           ESY+F+G
Sbjct: 208 ESYAFQG 214
>NP_006446
          Length = 437

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  ESYSFKG 9
          E YSF+G
Sbjct: 21 EKYSFRG 27
>NP_001724
          Length = 705

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   ESYSFKG 9
           ESY+F+G
Sbjct: 550 ESYNFEG 556
>XP_005257010
          Length = 492

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ESYSFKG 9
           E YSF+G
Sbjct: 119 EKYSFRG 125
>XP_005257009
          Length = 528

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ESYSFKG 9
           E YSF+G
Sbjct: 112 EKYSFRG 118
>XP_006721703
          Length = 531

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ESYSFKG 9
           E YSF+G
Sbjct: 119 EKYSFRG 125
>NP_001268885
          Length = 3631

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1    SSESYSFKG 9
            + E+YS++G
Sbjct: 2751 NGENYSYRG 2759
>NP_443128
          Length = 3487

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1    SSESYSFKG 9
            + E+YS++G
Sbjct: 2728 NGENYSYRG 2736
>NP_060353
          Length = 485

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SE+Y+F G
Sbjct: 155 SENYAFAG 162
>NP_001129120
          Length = 1446

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 882 TSDSYGFK 889
>NP_443132
          Length = 3538

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SYSFKG 9
            SY+FKG
Sbjct: 3335 SYNFKG 3340
>NP_002835
          Length = 1440

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 882 TSDSYGFK 889
>NP_937757
          Length = 3667

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SYSFKG 9
            SY+FKG
Sbjct: 3464 SYNFKG 3469
>NP_937756
          Length = 3707

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4    SYSFKG 9
            SY+FKG
Sbjct: 3504 SYNFKG 3509
>NP_001159898
          Length = 393

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  SESYSFKG 9
          SE+Y+F G
Sbjct: 63 SENYAFAG 70
>XP_006725090
          Length = 711

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 147 TSDSYGFK 154
>XP_006725086
          Length = 1057

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 493 TSDSYGFK 500
>XP_006725085
          Length = 1375

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 811 TSDSYGFK 818
>XP_006725084
          Length = 1375

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 811 TSDSYGFK 818
>XP_006725083
          Length = 1439

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 881 TSDSYGFK 888
>XP_006725082
          Length = 1445

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 881 TSDSYGFK 888
>XP_006724604
          Length = 393

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  SESYSFKG 9
          SE+Y+F G
Sbjct: 63 SENYAFAG 70
>XP_006724603
          Length = 485

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SE+Y+F G
Sbjct: 155 SENYAFAG 162
>XP_006724602
          Length = 485

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SE+Y+F G
Sbjct: 155 SENYAFAG 162
>XP_006718462
          Length = 4966

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ESYSFKG 9
           +SYSF G
Sbjct: 917 QSYSFNG 923
>XP_006715601
          Length = 1081

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 517 TSDSYGFK 524
>XP_005267142
          Length = 1439

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 881 TSDSYGFK 888
>XP_006715600
          Length = 1445

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 881 TSDSYGFK 888
>XP_005267139
          Length = 1464

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 906 TSDSYGFK 913
>XP_006715599
          Length = 1469

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 905 TSDSYGFK 912
>XP_006715598
          Length = 1470

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S+SY FK
Sbjct: 906 TSDSYGFK 913
>XP_006710008
          Length = 2014

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ESYSFKG 9
           +SYSF G
Sbjct: 917 QSYSFNG 923
>NP_005561
          Length = 510

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 5  YSFKG 9
          YSFKG
Sbjct: 50 YSFKG 54
>NP_001122108
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SES SF+G
Sbjct: 578 SESTSFQG 585
>NP_001166217
          Length = 749

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           S+SY F+G
Sbjct: 166 SKSYVFRG 173
>NP_006539
          Length = 599

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   ESYSFK 8
           E+YSFK
Sbjct: 146 ENYSFK 151
>NP_001007226
          Length = 556

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   ESYSFK 8
           E+YSFK
Sbjct: 146 ENYSFK 151
>NP_060124
          Length = 1589

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SSESYS 6
           SSESYS
Sbjct: 697 SSESYS 702
>NP_542785
          Length = 511

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S SYS+K
Sbjct: 469 ASSSYSYK 476
>NP_001166216
          Length = 767

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           S+SY F+G
Sbjct: 184 SKSYVFRG 191
>NP_036260
          Length = 919

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           S ES++FK
Sbjct: 822 SKESFAFK 829
>NP_006355
          Length = 765

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           S+SY F+G
Sbjct: 184 SKSYVFRG 191
>NP_001139698
          Length = 469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S SYS+K
Sbjct: 427 ASSSYSYK 434
>NP_001139697
          Length = 511

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           +S SYS+K
Sbjct: 469 ASSSYSYK 476
>NP_060212
          Length = 1178

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SSESYS 6
           SSESYS
Sbjct: 632 SSESYS 637
>NP_057608
          Length = 474

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SESYSFK 8
           +ES+SFK
Sbjct: 389 NESFSFK 395
>NP_116780
          Length = 767

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           S+SY F+G
Sbjct: 184 SKSYVFRG 191
>NP_001276881
          Length = 746

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           S ++YSFK
Sbjct: 583 SDKAYSFK 590
>NP_001276880
          Length = 746

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           S ++YSFK
Sbjct: 583 SDKAYSFK 590
>NP_001008401
          Length = 746

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   SSESYSFK 8
           S ++YSFK
Sbjct: 583 SDKAYSFK 590
>NP_001180236
          Length = 1589

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SSESYS 6
           SSESYS
Sbjct: 697 SSESYS 702
>NP_001182726
          Length = 130

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  SYSFKG 9
          S+SFKG
Sbjct: 88 SFSFKG 93
>XP_006722557
          Length = 1076

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SSESYS 6
           SSESYS
Sbjct: 530 SSESYS 535
>XP_006722556
          Length = 1100

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   SSESYS 6
           SSESYS
Sbjct: 554 SSESYS 559
>XP_006721116
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SESYSFK 8
           +ES+SFK
Sbjct: 328 NESFSFK 334
>XP_005255419
          Length = 413

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SESYSFK 8
           +ES+SFK
Sbjct: 328 NESFSFK 334
>XP_005255418
          Length = 453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SESYSFK 8
           +ES+SFK
Sbjct: 389 NESFSFK 395
>XP_005267319
          Length = 789

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           S+SY F+G
Sbjct: 184 SKSYVFRG 191
>XP_006715792
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SES SF+G
Sbjct: 578 SESTSFQG 585
>XP_006715791
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SES SF+G
Sbjct: 578 SESTSFQG 585
>XP_006715790
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SES SF+G
Sbjct: 578 SESTSFQG 585
>XP_006715789
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SES SF+G
Sbjct: 578 SESTSFQG 585
>XP_006715788
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           SES SF+G
Sbjct: 578 SESTSFQG 585
>NP_056179
          Length = 160

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SYSFKG 9
           S+SFKG
Sbjct: 118 SFSFKG 123
>NP_006354
          Length = 767

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           S+SY F+G
Sbjct: 184 SKSYVFRG 191
>NP_116781
          Length = 767

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SESYSFKG 9
           S+SY F+G
Sbjct: 184 SKSYVFRG 191
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.293    0.111    0.279 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 521,699
Number of extensions: 958
Number of successful extensions: 68
Number of sequences better than 10000.0: 68
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 68
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.0 bits)
S2: 28 (15.4 bits)

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