Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 20 390 NP_009297 20 390 NP_055553 17 4312 XP_005257925 17 4312 XP_005257924 17 4312 XP_005257923 17 4312 XP_005257922 17 4312 XP_005257921 17 4312 XP_006722263 17 4312 XP_005257920 17 4312 NP_000193 16 7355 NP_006114 16 7355 NP_000126 15 9605 NP_001018122 15 9605 NP_001010872 15 9605 NP_001138473 15 9605 NP_001273096 15 9605 NP_001159643 15 9605 NP_001159639 15 9605 NP_001002836 15 9605 NP_001159641 15 9605 NP_001159640 15 9605 NP_001159642 15 9605 NP_055212 15 9605 XP_005256351 15 9605 XP_006721230 15 9605 XP_006716999 15 9605 XP_005251721 15 9605 XP_006716998 15 9605 XP_006716997 15 9605 XP_005277661 15 9605 XP_006715085 15 9605>NP_005148 Length = 1130 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSEQMASHS 9 +SEQMASHS Sbjct: 1046 NSEQMASHS 1054>NP_009297 Length = 1149 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SSEQMASHS 9 +SEQMASHS Sbjct: 1065 NSEQMASHS 1073>NP_055553 Length = 1356 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSEQMASH 8 S+EQM SH Sbjct: 696 STEQMLSH 703>XP_005257925 Length = 850 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSEQMASH 8 S+EQM SH Sbjct: 160 STEQMLSH 167>XP_005257924 Length = 1122 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSEQMASH 8 S+EQM SH Sbjct: 432 STEQMLSH 439>XP_005257923 Length = 1131 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSEQMASH 8 S+EQM SH Sbjct: 441 STEQMLSH 448>XP_005257922 Length = 1366 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSEQMASH 8 S+EQM SH Sbjct: 706 STEQMLSH 713>XP_005257921 Length = 1370 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSEQMASH 8 S+EQM SH Sbjct: 710 STEQMLSH 717>XP_006722263 Length = 1390 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSEQMASH 8 S+EQM SH Sbjct: 700 STEQMLSH 707>XP_005257920 Length = 1390 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SSEQMASH 8 S+EQM SH Sbjct: 700 STEQMLSH 707>NP_000193 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EQMASHS 9 +Q+ASHS Sbjct: 65 DQLASHS 71>NP_006114 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EQMASHS 9 +Q+ASHS Sbjct: 65 DQLASHS 71>NP_000126 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 82 SSEAYANHS 90>NP_001018122 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 82 SSEAYANHS 90>NP_001010872 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE + SHS Sbjct: 920 SSELLRSHS 928>NP_001138473 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 232 SSETTAAHS 240>NP_001273096 Length = 1424 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 82 SSEAYANHS 90>NP_001159643 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 232 SSETTAAHS 240>NP_001159639 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 216 SSETTAAHS 224>NP_001002836 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EQMASH 8 +QMASH Sbjct: 18 QQMASH 23>NP_001159641 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 223 SSETTAAHS 231>NP_001159640 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 198 SSETTAAHS 206>NP_001159642 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 198 SSETTAAHS 206>NP_055212 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 198 SSETTAAHS 206>XP_005256351 Length = 1463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 82 SSEAYANHS 90>XP_006721230 Length = 1412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 82 SSEAYANHS 90>XP_006716999 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 198 SSETTAAHS 206>XP_005251721 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 198 SSETTAAHS 206>XP_006716998 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 242 SSETTAAHS 250>XP_006716997 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 256 SSETTAAHS 264>XP_005277661 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE A+HS Sbjct: 337 SSEPCATHS 345>XP_006715085 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SSEQMASHS 9 SSE + SHS Sbjct: 920 SSELLRSHS 928Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.278 0.0834 0.184 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 470,451 Number of extensions: 653 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |