Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 509 NP_001186101 17 2528 NP_653278 17 2528 NP_945193 17 2528 NP_079215 17 2528 XP_006721770 17 2528 XP_005257122 17 2528 XP_006721337 17 2528 XP_006721336 17 2528 XP_005256210 17 2528 NP_001138328 17 3301 NP_001138329 17 3301 NP_006178 17 3301 NP_060643 17 3301 NP_877435 17 3301 XP_003960363 17 3301 XP_005253946 17 3301 XP_006719048 17 3301 XP_005253761 17 3301 XP_002342351 17 3301 XP_003403809 17 3301 NP_071919 17 4312 NP_001243479 17 4312 NP_444251 17 4312 NP_001183980 17 4312 XP_005268060 17 4312 NP_057028 16 5631 NP_001119583 16 5631 NP_001139287 16 5631 NP_004328 16 5631 NP_001094861 16 5631 NP_115583 16 7355 NP_001275763 16 7355 NP_036542 16 7355 NP_008859 16 7355 NP_742066 16 7355 NP_001107572 16 7355 NP_001107571 16 7355 NP_963869 16 7355 NP_001230262 16 7355 NP_001230261 16 7355 NP_001186982 16 7355 NP_001186983 16 7355 XP_006722983 16 7355 XP_005255309 16 7355 XP_006719632 16 7355 XP_006719631 16 7355 XP_005264197 16 7355 XP_006712004 16 7355 NP_001258463 15 9605 NP_001380 15 9605 NP_000058 15 9605 NP_115696 15 9605 NP_001705 15 9605 NP_114141 15 9605 XP_006724038 15 9605 XP_005253523 15 9605 XP_006719197 15 9605 XP_005253522 15 9605 XP_005253222 15 9605 XP_006718408 15 9605 XP_005253221 15 9605 NP_001003398 15 9605>NP_004295 Length = 1620 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRVLKGGSL 9 SRVLKGGS+ Sbjct: 124 SRVLKGGSV 132>NP_001186101 Length = 792 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 RVLKGG L Sbjct: 304 RVLKGGPL 311>NP_653278 Length = 790 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 RVLKGG L Sbjct: 304 RVLKGGPL 311>NP_945193 Length = 801 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 RVLKGG L Sbjct: 315 RVLKGGPL 322>NP_079215 Length = 717 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SRVL GG+L Sbjct: 549 SRVLMGGTL 557>XP_006721770 Length = 729 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 RVLKGG L Sbjct: 241 RVLKGGPL 248>XP_005257122 Length = 735 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 RVLKGG L Sbjct: 247 RVLKGGPL 254>XP_006721337 Length = 591 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SRVL GG+L Sbjct: 423 SRVLMGGTL 431>XP_006721336 Length = 591 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SRVL GG+L Sbjct: 423 SRVLMGGTL 431>XP_005256210 Length = 716 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SRVL GG+L Sbjct: 548 SRVLMGGTL 556>NP_001138328 Length = 790 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLKGGSL 9 +LKGGSL Sbjct: 653 ILKGGSL 659>NP_001138329 Length = 758 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLKGGSL 9 +LKGGSL Sbjct: 621 ILKGGSL 627>NP_006178 Length = 1087 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SRVLKGGS 8 SRV KGGS Sbjct: 454 SRVSKGGS 461>NP_060643 Length = 790 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLKGGSL 9 +LKGGSL Sbjct: 653 ILKGGSL 659>NP_877435 Length = 1102 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SRVLKGGSL 9 +R+L+GGSL Sbjct: 439 ARLLEGGSL 447>XP_003960363 Length = 319 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRVLKGG 7 SRV+KGG Sbjct: 252 SRVIKGG 258>XP_005253946 Length = 1089 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 SRVLKGGS 8 SRV KGGS Sbjct: 454 SRVSKGGS 461>XP_006719048 Length = 776 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLKGGSL 9 +LKGGSL Sbjct: 639 ILKGGSL 645>XP_005253761 Length = 790 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLKGGSL 9 +LKGGSL Sbjct: 653 ILKGGSL 659>XP_002342351 Length = 319 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRVLKGG 7 SRV+KGG Sbjct: 252 SRVIKGG 258>XP_003403809 Length = 319 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRVLKGG 7 SRV+KGG Sbjct: 252 SRVIKGG 258>NP_071919 Length = 675 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRVLKGGS 8 SR++KGG+ Sbjct: 281 SRIVKGGA 288>NP_001243479 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRVLKGGS 8 SR++KGG+ Sbjct: 247 SRIVKGGA 254>NP_444251 Length = 570 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRVLKGG 7 SRVL+GG Sbjct: 47 SRVLRGG 53>NP_001183980 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRVLKGG 7 SRVL+GG Sbjct: 47 SRVLRGG 53>XP_005268060 Length = 641 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRVLKGGS 8 SR++KGG+ Sbjct: 247 SRIVKGGA 254>NP_057028 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 R+L+GG L Sbjct: 19 RILRGGKL 26>NP_001119583 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 R LKGG+L Sbjct: 516 RFLKGGAL 523>NP_001139287 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 R+L+GG L Sbjct: 19 RILRGGKL 26>NP_004328 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 R LKGG+L Sbjct: 472 RFLKGGAL 479>NP_001094861 Length = 592 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 +RVL GG+L Sbjct: 457 ARVLPGGTL 465>NP_115583 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 R+L GG+L Sbjct: 133 RILSGGAL 140>NP_001275763 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 R+L GG+L Sbjct: 133 RILSGGAL 140>NP_036542 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SR L+GG+L Sbjct: 780 SRQLEGGNL 788>NP_008859 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVLKGGS 8 ++LKGGS Sbjct: 556 QILKGGS 562>NP_742066 Length = 1493 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLKGGSL 9 VLKGG L Sbjct: 726 VLKGGEL 732>NP_001107572 Length = 809 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SR L+GG+L Sbjct: 736 SRQLEGGNL 744>NP_001107571 Length = 840 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SR L+GG+L Sbjct: 767 SRQLEGGNL 775>NP_963869 Length = 910 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SR L+GG+L Sbjct: 837 SRQLEGGNL 845>NP_001230262 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SR L+GG+L Sbjct: 806 SRQLEGGNL 814>NP_001230261 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SR L+GG+L Sbjct: 850 SRQLEGGNL 858>NP_001186982 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVLKGGS 8 ++LKGGS Sbjct: 470 QILKGGS 476>NP_001186983 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVLKGGS 8 ++LKGGS Sbjct: 556 QILKGGS 562>XP_006722983 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RVLKGGSL 9 R+L GG+L Sbjct: 133 RILSGGAL 140>XP_005255309 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRVLKGGSL 9 SR L+GG+L Sbjct: 786 SRQLEGGNL 794>XP_006719632 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVLKGGS 8 ++LKGGS Sbjct: 556 QILKGGS 562>XP_006719631 Length = 664 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RVLKGGS 8 ++LKGGS Sbjct: 559 QILKGGS 565>XP_005264197 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLKGGSL 9 VLKGG L Sbjct: 726 VLKGGEL 732>XP_006712004 Length = 1488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLKGGSL 9 VLKGG L Sbjct: 721 VLKGGEL 727>NP_001258463 Length = 1994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VLKGGS 8 +LKGGS Sbjct: 447 ILKGGS 452>NP_001380 Length = 2012 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VLKGGS 8 +LKGGS Sbjct: 447 ILKGGS 452>NP_000058 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLKGGSL 9 VLKGG L Sbjct: 78 VLKGGPL 84>NP_115696 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SRVLKGG 7 SR+ KGG Sbjct: 37 SRIAKGG 43>NP_001705 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRVLKGGSL 9 SRV + GSL Sbjct: 541 SRVTRSGSL 549>NP_114141 Length = 5635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RVLKGGS 8 R+L GGS Sbjct: 3201 RILSGGS 3207>XP_006724038 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VLKGGS 8 +LKGGS Sbjct: 342 ILKGGS 347>XP_005253523 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRVLKGGSL 9 SRV + GSL Sbjct: 541 SRVTRSGSL 549>XP_006719197 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRVLKGGSL 9 SRV + GSL Sbjct: 541 SRVTRSGSL 549>XP_005253522 Length = 827 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRVLKGGSL 9 SRV + GSL Sbjct: 541 SRVTRSGSL 549>XP_005253222 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SRVLKGG 7 SR+ KGG Sbjct: 45 SRIAKGG 51>XP_006718408 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SRVLKGG 7 SR+ KGG Sbjct: 45 SRIAKGG 51>XP_005253221 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 SRVLKGG 7 SR+ KGG Sbjct: 45 SRIAKGG 51>NP_001003398 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRVLKGGSL 9 SRV + GSL Sbjct: 541 SRVTRSGSL 549Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.137 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 656,604 Number of extensions: 686 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |