Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 19 665 NP_000170 19 665 XP_005264328 19 665 NP_001073881 17 4312 XP_006713622 17 4312 XP_005247320 17 4312 XP_005247319 17 4312 XP_005247318 17 4312 XP_005247315 17 4312 XP_005247314 17 4312 XP_005247313 17 4312 XP_005247312 17 4312 XP_006713871 16 5631 XP_006713870 16 5631 NP_203528 16 5631 NP_000468 16 7355 NP_612465 16 7355 NP_001273723 16 7355 NP_001009811 16 7355 NP_055799 16 7355 XP_005257233 16 7355 XP_005257231 16 7355 NP_060244 15 9605 NP_997201 15 9605 XP_006726645 15 9605 XP_005275672 15 9605 XP_005275670 15 9605 XP_005275669 15 9605 XP_005275668 15 9605 XP_005275541 15 9605 XP_005275539 15 9605 XP_005275538 15 9605 XP_005275537 15 9605 XP_005275368 15 9605 XP_005275366 15 9605 XP_005275365 15 9605 XP_005275364 15 9605 XP_005275246 15 9605 XP_005275244 15 9605 XP_005275243 15 9605 XP_005275242 15 9605 XP_005275111 15 9605 XP_005275109 15 9605 XP_005275108 15 9605 XP_005275107 15 9605 XP_005272956 15 9605 XP_005272954 15 9605 XP_005272953 15 9605 XP_005272952 15 9605 XP_005262136 15 9605 XP_006720878 15 9605 XP_005249475 15 9605 XP_005249473 15 9605 XP_005249472 15 9605 XP_005249471 15 9605 XP_006715190 15 9605 XP_006710054 15 9605 NP_037507 15 9605>NP_001268421 Length = 1230 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRQIKKQRV 9 SRQIKK+RV Sbjct: 112 SRQIKKRRV 120>NP_000170 Length = 1360 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRQIKKQRV 9 SRQIKK+RV Sbjct: 242 SRQIKKRRV 250>XP_005264328 Length = 1261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRQIKKQRV 9 SRQIKK+RV Sbjct: 143 SRQIKKRRV 151>NP_001073881 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_006713622 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247320 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247319 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247318 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247315 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247314 Length = 1195 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 928 SRQLKKMR 935>XP_005247313 Length = 1196 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 929 SRQLKKMR 936>XP_005247312 Length = 1231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRQIKKQR 8 SRQ+KK R Sbjct: 964 SRQLKKMR 971>XP_006713871 Length = 530 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQIKKQRV 9 RQ++KQR+ Sbjct: 381 RQVEKQRL 388>XP_006713870 Length = 769 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQIKKQRV 9 RQ++KQR+ Sbjct: 620 RQVEKQRL 627>NP_203528 Length = 767 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RQIKKQRV 9 RQ++KQR+ Sbjct: 618 RQVEKQRL 625>NP_000468 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RQIKKQ 7 RQIKKQ Sbjct: 545 RQIKKQ 550>NP_612465 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQIKKQR 8 RQ+KKQ+ Sbjct: 20 RQLKKQK 26>NP_001273723 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQIKKQR 8 +Q+KKQR Sbjct: 8 QQVKKQR 14>NP_001009811 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRQIKKQR 8 SRQ+++QR Sbjct: 610 SRQLQRQR 617>NP_055799 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRQIKKQR 8 SRQ+++QR Sbjct: 610 SRQLQRQR 617>XP_005257233 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRQIKKQR 8 SRQ+++QR Sbjct: 610 SRQLQRQR 617>XP_005257231 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRQIKKQR 8 SRQ+++QR Sbjct: 610 SRQLQRQR 617>NP_060244 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QIKKQR 8 Q+KKQR Sbjct: 411 QVKKQR 416>NP_997201 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQIKKQR 8 RQ+K+QR Sbjct: 348 RQLKEQR 354>XP_006726645 Length = 130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKKQRV 9 Q+K+QRV Sbjct: 58 QVKEQRV 64>XP_005275672 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275670 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 363 SRENRKQRI 371>XP_005275669 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 374 SRENRKQRI 382>XP_005275668 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275541 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275539 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 363 SRENRKQRI 371>XP_005275538 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 374 SRENRKQRI 382>XP_005275537 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275368 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275366 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 363 SRENRKQRI 371>XP_005275365 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 374 SRENRKQRI 382>XP_005275364 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275246 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275244 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 363 SRENRKQRI 371>XP_005275243 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 374 SRENRKQRI 382>XP_005275242 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275111 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005275109 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 363 SRENRKQRI 371>XP_005275108 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 374 SRENRKQRI 382>XP_005275107 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005272956 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005272954 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 363 SRENRKQRI 371>XP_005272953 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 374 SRENRKQRI 382>XP_005272952 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005262136 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RQIKKQR 8 RQ+K+QR Sbjct: 305 RQLKEQR 311>XP_006720878 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKKQRV 9 Q+K+QRV Sbjct: 58 QVKEQRV 64>XP_005249475 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_005249473 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 363 SRENRKQRI 371>XP_005249472 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 374 SRENRKQRI 382>XP_005249471 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRQIKKQRV 9 SR+ +KQR+ Sbjct: 386 SRENRKQRI 394>XP_006715190 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QIKKQR 8 Q+KKQR Sbjct: 411 QVKKQR 416>XP_006710054 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QIKKQRV 9 Q+K+QRV Sbjct: 58 QVKEQRV 64>NP_037507 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RQIKKQRV 9 RQ+++QR+ Sbjct: 164 RQVRRQRL 171Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.126 0.295 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 487,188 Number of extensions: 891 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |