Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 18 1135 NP_444254 18 1135 NP_444253 18 1135 NP_444255 18 1135 XP_005247551 18 1135 XP_005247550 18 1135 XP_006713712 18 1135 XP_005247549 18 1135 NP_054777 17 3301 NP_004553 15 9605 NP_054642 15 9605 NP_892006 15 9605 NP_001245384 15 9605 NP_001245383 15 9605 NP_001245385 15 9605 NP_149062 15 9605 NP_001239319 15 9605 NP_001239321 15 9605 NP_001239320 15 9605 NP_001239315 15 9605 NP_001239322 15 9605 NP_001239314 15 9605 NP_006049 15 9605 XP_006715488 15 9605 XP_006715487 15 9605 XP_006715486 15 9605 XP_006715485 15 9605 XP_006715484 15 9605 XP_006715483 15 9605 XP_006715482 15 9605 XP_006715481 15 9605 XP_006715480 15 9605 XP_006715479 15 9605 XP_006715478 15 9605 XP_006715477 15 9605 XP_006715476 15 9605 XP_006715475 15 9605 XP_006715474 15 9605 XP_006715473 15 9605 XP_006715472 15 9605 XP_006715471 15 9605 XP_006715470 15 9605 XP_006714815 15 9605 XP_006714814 15 9605 XP_005268412 15 9605>NP_444256 Length = 1794 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRQAQVTLT 9 SRQAQV LT Sbjct: 1249 SRQAQVNLT 1257>NP_444254 Length = 1845 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRQAQVTLT 9 SRQAQV LT Sbjct: 1249 SRQAQVNLT 1257>NP_444253 Length = 1914 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRQAQVTLT 9 SRQAQV LT Sbjct: 1318 SRQAQVNLT 1326>NP_444255 Length = 1863 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRQAQVTLT 9 SRQAQV LT Sbjct: 1318 SRQAQVNLT 1326>XP_005247551 Length = 1855 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRQAQVTLT 9 SRQAQV LT Sbjct: 1259 SRQAQVNLT 1267>XP_005247550 Length = 1856 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRQAQVTLT 9 SRQAQV LT Sbjct: 1328 SRQAQVNLT 1336>XP_006713712 Length = 1923 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRQAQVTLT 9 SRQAQV LT Sbjct: 1328 SRQAQVNLT 1336>XP_005247549 Length = 1924 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRQAQVTLT 9 SRQAQV LT Sbjct: 1328 SRQAQVNLT 1336>NP_054777 Length = 423 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RQAQVTL 8 RQAQVTL Sbjct: 330 RQAQVTL 336>NP_004553 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQAQVTLT 9 RQA +TLT Sbjct: 170 RQATLTLT 177>NP_054642 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQAQVTLT 9 RQA +TLT Sbjct: 170 RQATLTLT 177>NP_892006 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5650 QAQATLT 5656>NP_001245384 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>NP_001245383 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>NP_001245385 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>NP_149062 Length = 8749 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5579 QAQATLT 5585>NP_001239319 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>NP_001239321 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>NP_001239320 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>NP_001239315 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 445 QAQVTLS 451>NP_001239322 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>NP_001239314 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>NP_006049 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>XP_006715488 Length = 8721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715487 Length = 8744 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715486 Length = 8758 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715485 Length = 8793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5604 QAQATLT 5610>XP_006715484 Length = 8794 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5605 QAQATLT 5611>XP_006715483 Length = 8795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715482 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5650 QAQATLT 5656>XP_006715481 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5610 QAQATLT 5616>XP_006715480 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715479 Length = 8804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715478 Length = 8809 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715477 Length = 8822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5633 QAQATLT 5639>XP_006715476 Length = 8823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715475 Length = 8827 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715474 Length = 8829 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5640 QAQATLT 5646>XP_006715473 Length = 8832 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715472 Length = 8839 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5650 QAQATLT 5656>XP_006715471 Length = 8842 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006715470 Length = 8846 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 QAQVTLT 9 QAQ TLT Sbjct: 5657 QAQATLT 5663>XP_006714815 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>XP_006714814 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504>XP_005268412 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QAQVTLT 9 QAQVTL+ Sbjct: 498 QAQVTLS 504Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.109 0.250 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 270,370 Number of extensions: 273 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |