Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 509 XP_006716142 20 509 XP_005250088 20 509 XP_006716141 20 509 XP_005250085 20 509 XP_006716140 20 509 XP_005250084 20 509 XP_005250083 20 509 XP_005250082 20 509 NP_001106697 17 2528 NP_055732 17 2528 NP_001106699 17 2528 XP_006710520 17 2528 XP_006710519 17 2528 XP_006710518 17 2528 XP_006710517 17 2528 NP_055428 17 3301 NP_001139669 17 4312 NP_940867 16 5631 XP_006724697 16 5631 XP_006724696 16 5631 XP_006724695 16 5631 XP_006724694 16 5631 XP_005270453 16 7355 XP_005270452 16 7355 XP_005270451 16 7355 NP_006836 16 7355 NP_001276953 15 9605 NP_714912 15 9605 NP_001276952 15 9605 NP_005526 15 9605 NP_001245283 15 9605 NP_689596 15 9605 NP_640336 15 9605 NP_001152757 15 9605 NP_001152767 15 9605 NP_004238 15 9605 NP_001245282 15 9605 NP_001136077 15 9605 XP_006722804 15 9605 XP_005262802 15 9605 XP_005262801 15 9605 XP_005262800 15 9605 XP_005262799 15 9605 XP_005262798 15 9605>NP_733751 Length = 4911 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1933 SRPLQMNET 1941>XP_006716142 Length = 4927 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1950 SRPLQMNET 1958>XP_005250088 Length = 4928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1950 SRPLQMNET 1958>XP_006716141 Length = 4959 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1950 SRPLQMNET 1958>XP_005250085 Length = 4979 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1950 SRPLQMNET 1958>XP_006716140 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1950 SRPLQMNET 1958>XP_005250084 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1950 SRPLQMNET 1958>XP_005250083 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1949 SRPLQMNET 1957>XP_005250082 Length = 4983 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 SRPLQMN T Sbjct: 1950 SRPLQMNET 1958>NP_001106697 Length = 539 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RPLQMNVT 9 +PLQ+N+T Sbjct: 128 KPLQVNIT 135>NP_055732 Length = 438 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RPLQMNVT 9 +PLQ+N+T Sbjct: 128 KPLQVNIT 135>NP_001106699 Length = 480 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RPLQMNVT 9 +PLQ+N+T Sbjct: 128 KPLQVNIT 135>XP_006710520 Length = 406 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RPLQMNVT 9 +PLQ+N+T Sbjct: 128 KPLQVNIT 135>XP_006710519 Length = 438 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RPLQMNVT 9 +PLQ+N+T Sbjct: 128 KPLQVNIT 135>XP_006710518 Length = 480 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RPLQMNVT 9 +PLQ+N+T Sbjct: 128 KPLQVNIT 135>XP_006710517 Length = 581 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RPLQMNVT 9 +PLQ+N+T Sbjct: 128 KPLQVNIT 135>NP_055428 Length = 445 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 SRPLQMN 7 SRPLQ+N Sbjct: 66 SRPLQVN 72>NP_001139669 Length = 7081 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRPLQMNVT 9 S+PL +NVT Sbjct: 801 SKPLILNVT 809>NP_940867 Length = 1582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRPLQMNV 8 S+PLQM + Sbjct: 458 SKPLQMQI 465>XP_006724697 Length = 1526 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRPLQMNV 8 S+PLQM + Sbjct: 458 SKPLQMQI 465>XP_006724696 Length = 1534 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRPLQMNV 8 S+PLQM + Sbjct: 458 SKPLQMQI 465>XP_006724695 Length = 1574 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRPLQMNV 8 S+PLQM + Sbjct: 458 SKPLQMQI 465>XP_006724694 Length = 1582 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRPLQMNV 8 S+PLQM + Sbjct: 458 SKPLQMQI 465>XP_005270453 Length = 671 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PLQMNVT 9 PLQ NVT Sbjct: 27 PLQENVT 33>XP_005270452 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PLQMNVT 9 PLQ NVT Sbjct: 81 PLQENVT 87>XP_005270451 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PLQMNVT 9 PLQ NVT Sbjct: 72 PLQENVT 78>NP_006836 Length = 725 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 PLQMNVT 9 PLQ NVT Sbjct: 81 PLQENVT 87>NP_001276953 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PL+MNV Sbjct: 239 PLEMNV 244>NP_714912 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PL+MNV Sbjct: 199 PLEMNV 204>NP_001276952 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PL+MNV Sbjct: 199 PLEMNV 204>NP_005526 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PL+MNV Sbjct: 199 PLEMNV 204>NP_001245283 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RPLQMNVT 9 RPL+ N T Sbjct: 568 RPLKFNTT 575>NP_689596 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 SRPLQM 6 SRP+QM Sbjct: 666 SRPMQM 671>NP_640336 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PLQMN+ Sbjct: 462 PLQMNL 467>NP_001152757 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PLQMN+ Sbjct: 451 PLQMNL 456>NP_001152767 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PLQMN+ Sbjct: 444 PLQMNL 449>NP_004238 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RPLQMNVT 9 RPL+ N T Sbjct: 578 RPLKFNTT 585>NP_001245282 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RPLQMNVT 9 RPL+ N T Sbjct: 578 RPLKFNTT 585>NP_001136077 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RPLQMNVT 9 RPL+ N T Sbjct: 543 RPLKFNTT 550>XP_006722804 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PL+MNV Sbjct: 199 PLEMNV 204>XP_005262802 Length = 553 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PLQMN+ Sbjct: 439 PLQMNL 444>XP_005262801 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PLQMN+ Sbjct: 451 PLQMNL 456>XP_005262800 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PLQMN+ Sbjct: 462 PLQMNL 467>XP_005262799 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PLQMN+ Sbjct: 462 PLQMNL 467>XP_005262798 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 PLQMNV 8 PLQMN+ Sbjct: 462 PLQMNL 467Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.122 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 622,064 Number of extensions: 862 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |