Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005148 19 869 NP_009297 19 869 NP_060644 17 3301 NP_058431 17 4312 NP_005197 17 4312 NP_037529 17 4312 NP_001353 16 5631 NP_114404 16 5631 NP_076413 16 5631 XP_006714556 16 5631 XP_006714555 16 5631 NP_001009877 16 5631 NP_002070 16 7355 NP_055641 16 7355 NP_003598 16 7355 XP_005273381 16 7355 XP_005273380 16 7355 XP_005273379 16 7355 XP_006711899 16 7355 XP_005273378 16 7355 XP_005273377 16 7355 XP_006711898 16 7355 XP_006711897 16 7355 XP_005273375 16 7355 XP_005273374 16 7355 NP_001243084 15 9605 NP_065752 15 9605 NP_001186398 15 9605 NP_001184151 15 9605 NP_001159371 15 9605 NP_001184149 15 9605 NP_001184152 15 9605 NP_001184150 15 9605 NP_038476 15 9605 NP_001098101 15 9605 NP_006194 15 9605 NP_001248396 15 9605 NP_872589 15 9605 NP_113627 15 9605 NP_001184147 15 9605 NP_001191819 15 9605 NP_001184148 15 9605 NP_115517 15 9605 XP_005248598 15 9605 XP_005248597 15 9605 XP_005248595 15 9605 XP_005248594 15 9605 NP_078785 15 9605>NP_005148 Length = 1130 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 SRLA GEEE Sbjct: 696 SRLATGEEE 704>NP_009297 Length = 1149 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 SRLA GEEE Sbjct: 715 SRLATGEEE 723>NP_060644 Length = 1059 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 SRLA GE+E Sbjct: 346 SRLARGEDE 354>NP_058431 Length = 304 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 SRL IG++E Sbjct: 85 SRLRIGDQE 93>NP_005197 Length = 204 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 SRL IG++E Sbjct: 85 SRLRIGDQE 93>NP_037529 Length = 384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LAIGEEE 9 LA+GEEE Sbjct: 85 LALGEEE 91>NP_001353 Length = 304 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRLAIGEEE 9 SRL +GE E Sbjct: 7 SRLVVGEGE 15>NP_114404 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRLAIGEE 8 SRLA+G E Sbjct: 278 SRLALGSE 285>NP_076413 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRLAIGEE 8 SRL++GE+ Sbjct: 568 SRLSVGEQ 575>XP_006714556 Length = 617 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRLAIGEE 8 SRL++GE+ Sbjct: 588 SRLSVGEQ 595>XP_006714555 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRLAIGEE 8 SRL++GE+ Sbjct: 567 SRLSVGEQ 574>NP_001009877 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRLAIGEE 8 SRL++GE+ Sbjct: 515 SRLSVGEQ 522>NP_002070 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SRLAIGEE 8 SRLA+G++ Sbjct: 85 SRLALGDD 92>NP_055641 Length = 1638 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1146 RIALGNEE 1153>NP_003598 Length = 1719 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1227 RIALGNEE 1234>XP_005273381 Length = 1732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1240 RIALGNEE 1247>XP_005273380 Length = 1751 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1197 RIALGNEE 1204>XP_005273379 Length = 1754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1262 RIALGNEE 1269>XP_006711899 Length = 1770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1278 RIALGNEE 1285>XP_005273378 Length = 1781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1227 RIALGNEE 1234>XP_005273377 Length = 1794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1240 RIALGNEE 1247>XP_006711898 Length = 1797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1243 RIALGNEE 1250>XP_006711897 Length = 1816 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1262 RIALGNEE 1269>XP_005273375 Length = 1829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1275 RIALGNEE 1282>XP_005273374 Length = 1832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLAIGEEE 9 R+A+G EE Sbjct: 1278 RIALGNEE 1285>NP_001243084 Length = 2290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 SRLAIGEE 8 SRL GEE Sbjct: 1863 SRLGAGEE 1870>NP_065752 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 +RLA GE+E Sbjct: 195 ARLARGEKE 203>NP_001186398 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 +RLA GE+E Sbjct: 217 ARLARGEKE 225>NP_001184151 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 564 AVGEEE 569>NP_001159371 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 727 AVGEEE 732>NP_001184149 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 658 AVGEEE 663>NP_001184152 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 497 AVGEEE 502>NP_001184150 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 486 AVGEEE 491>NP_038476 Length = 1556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LAIGEEE 9 ++IGEEE Sbjct: 701 ISIGEEE 707>NP_001098101 Length = 809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 788 AVGEEE 793>NP_006194 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 652 AVGEEE 657>NP_001248396 Length = 504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 137 AVGEEE 142>NP_872589 Length = 1524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LAIGEEE 9 ++IGEEE Sbjct: 669 ISIGEEE 675>NP_113627 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 SR A+GE+E Sbjct: 152 SRGALGEKE 160>NP_001184147 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 724 AVGEEE 729>NP_001191819 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRLAIGEEE 9 +RLA GE+E Sbjct: 195 ARLARGEKE 203>NP_001184148 Length = 687 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 666 AVGEEE 671>NP_115517 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 191 AVGEEE 196>XP_005248598 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 486 AVGEEE 491>XP_005248597 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 576 AVGEEE 581>XP_005248595 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 652 AVGEEE 657>XP_005248594 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 678 AVGEEE 683>NP_078785 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIGEEE 9 A+GEEE Sbjct: 285 AVGEEE 290Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.126 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 646,649 Number of extensions: 1060 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |