Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 509 NP_671714 20 509 XP_006715890 20 509 XP_005250160 20 509 XP_005250159 20 509 NP_055491 17 2528 NP_001018494 17 2528 NP_078847 17 3301 XP_005245779 17 4312 XP_005245778 17 4312 XP_005245777 17 4312 XP_005245776 17 4312 XP_005245775 17 4312 XP_005245774 17 4312 NP_005830 17 4312 NP_001186143 16 7355 NP_005519 16 7355 NP_525022 16 7355 NP_002228 16 7355 NP_001159773 16 7355 NP_078888 16 7355 XP_006723848 16 7355 XP_006722146 16 7355 XP_005256994 16 7355 XP_005256993 16 7355 XP_005256992 16 7355 XP_006721697 16 7355 XP_006721696 16 7355 XP_005256991 16 7355 XP_006718593 16 7355 XP_006718592 16 7355 XP_003846647 16 7355 NP_277025 15 9605 NP_001278274 15 9605 NP_277024 15 9605 NP_277022 15 9605 NP_001778 15 9605 NP_277021 15 9605 NP_775082 15 9605 NP_003377 15 9605 NP_076916 15 9605 NP_277071 15 9605 XP_006711131 15 9605 XP_006711129 15 9605 XP_006711128 15 9605 XP_006711127 15 9605 XP_006711126 15 9605 XP_006711125 15 9605>NP_005742 Length = 3907 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRFIELKQE 9 SRFIEL+QE Sbjct: 2035 SRFIELEQE 2043>NP_671714 Length = 3899 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRFIELKQE 9 SRFIEL+QE Sbjct: 2035 SRFIELEQE 2043>XP_006715890 Length = 3860 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRFIELKQE 9 SRFIEL+QE Sbjct: 1988 SRFIELEQE 1996>XP_005250160 Length = 3939 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRFIELKQE 9 SRFIEL+QE Sbjct: 2067 SRFIELEQE 2075>XP_005250159 Length = 3952 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SRFIELKQE 9 SRFIEL+QE Sbjct: 2080 SRFIELEQE 2088>NP_055491 Length = 1186 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 SRFI+LK E Sbjct: 863 SRFIQLKLE 871>NP_001018494 Length = 1188 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 SRFI+LK E Sbjct: 863 SRFIQLKLE 871>NP_078847 Length = 132 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFIELKQE 9 R+++LKQE Sbjct: 72 RYVQLKQE 79>XP_005245779 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 S F+ELK+E Sbjct: 121 SAFLELKKE 129>XP_005245778 Length = 902 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 S F+ELK+E Sbjct: 121 SAFLELKKE 129>XP_005245777 Length = 915 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 S F+ELK+E Sbjct: 121 SAFLELKKE 129>XP_005245776 Length = 916 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 S F+ELK+E Sbjct: 121 SAFLELKKE 129>XP_005245775 Length = 917 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 S F+ELK+E Sbjct: 121 SAFLELKKE 129>XP_005245774 Length = 918 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 S F+ELK+E Sbjct: 121 SAFLELKKE 129>NP_005830 Length = 904 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 S F+ELK+E Sbjct: 121 SAFLELKKE 129>NP_001186143 Length = 187 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRFIELKQE 9 S+F+EL++E Sbjct: 175 SQFLELQRE 183>NP_005519 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRFIELKQ 8 SRF+EL + Sbjct: 74 SRFVELSE 81>NP_525022 Length = 1624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFIELKQE 9 RF++LK+E Sbjct: 853 RFLKLKKE 860>NP_002228 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FIELKQE 9 ++ELKQE Sbjct: 467 YLELKQE 473>NP_001159773 Length = 702 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 +RF+E KQ+ Sbjct: 681 ARFLERKQQ 689>NP_078888 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 +RF+E KQ+ Sbjct: 758 ARFLERKQQ 766>XP_006723848 Length = 513 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FIELKQE 9 ++ELKQE Sbjct: 467 YLELKQE 473>XP_006722146 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 +RF+E KQ+ Sbjct: 731 ARFLERKQQ 739>XP_005256994 Length = 1443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFIELKQE 9 RF++LK+E Sbjct: 861 RFLKLKKE 868>XP_005256993 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFIELKQE 9 RF++LK+E Sbjct: 772 RFLKLKKE 779>XP_005256992 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFIELKQE 9 RF++LK+E Sbjct: 772 RFLKLKKE 779>XP_006721697 Length = 1625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFIELKQE 9 RF++LK+E Sbjct: 861 RFLKLKKE 868>XP_006721696 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFIELKQE 9 RF++LK+E Sbjct: 861 RFLKLKKE 868>XP_005256991 Length = 1632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RFIELKQE 9 RF++LK+E Sbjct: 861 RFLKLKKE 868>XP_006718593 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRFIELKQ 8 SRF+EL + Sbjct: 74 SRFVELSE 81>XP_006718592 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRFIELKQ 8 SRF+EL + Sbjct: 74 SRFVELSE 81>XP_003846647 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRFIELKQE 9 +RF+E KQ+ Sbjct: 495 ARFLERKQQ 503>NP_277025 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 186 IELKQE 191>NP_001278274 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 393 IELKQE 398>NP_277024 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 369 IELKQE 374>NP_277022 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 147 IELKQE 152>NP_001778 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 416 IELKQE 421>NP_277021 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 403 IELKQE 408>NP_775082 Length = 2721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFIELKQE 9 RF+EL+ E Sbjct: 1255 RFVELQTE 1262>NP_003377 Length = 2812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RFIELKQE 9 RF+EL+ E Sbjct: 1255 RFVELQTE 1262>NP_076916 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 401 IELKQE 406>NP_277071 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 391 IELKQE 396>XP_006711131 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 359 IELKQE 364>XP_006711129 Length = 781 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 402 IELKQE 407>XP_006711128 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 406 IELKQE 411>XP_006711127 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 412 IELKQE 417>XP_006711126 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 416 IELKQE 421>XP_006711125 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IELKQE 9 IELKQE Sbjct: 416 IELKQE 421Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.135 0.330 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 512,193 Number of extensions: 980 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |