Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 18 1935 XP_005271924 18 1935 XP_005271923 18 1935 XP_006715629 17 2528 NP_078970 17 2528 NP_001278086 17 4312 NP_001181876 17 4312 NP_937887 17 4312 NP_937884 17 4312 NP_004944 17 4312 NP_001181875 17 4312 NP_937885 17 4312 NP_886553 17 4312 NP_689836 16 5631 NP_001139206 16 5631 NP_001163873 16 5631 NP_001231892 16 5631 NP_001104488 16 5631 NP_660093 16 5631 NP_892009 16 5631 NP_005186 16 5631 XP_006718429 16 5631 XP_006718428 16 5631 XP_006718427 16 5631 NP_001796 16 7355 NP_001274353 16 7355 NP_001272758 16 7355 NP_001274364 16 7355 NP_004355 16 7355 NP_057427 16 7355 NP_060395 16 7355 NP_001123361 16 7355 NP_001913 16 7355 XP_006722770 16 7355 XP_006722769 16 7355 XP_006722768 16 7355 XP_005272521 16 7355 XP_006716870 16 7355 XP_006716869 16 7355 XP_006716868 16 7355 XP_006716867 16 7355 NP_003633 15 9605 NP_060396 15 9605 NP_001035810 15 9605 NP_000393 15 9605 NP_689658 15 9605 NP_689632 15 9605 NP_060442 15 9605 XP_005274715 15 9605 XP_005274714 15 9605 XP_006720255 15 9605 XP_006720254 15 9605 XP_005273469 15 9605 XP_005273468 15 9605 XP_005273467 15 9605 XP_005273466 15 9605 XP_006712871 15 9605 NP_005137 15 9605>NP_001261 Length = 1710 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 SRDLAKK + Sbjct: 1314 SRDLAKKEA 1322>XP_005271924 Length = 1710 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 SRDLAKK + Sbjct: 1314 SRDLAKKEA 1322>XP_005271923 Length = 1798 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 SRDLAKK + Sbjct: 1314 SRDLAKKEA 1322>XP_006715629 Length = 1667 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 +RD+ KKRS Sbjct: 367 ARDIGKKRS 375>NP_078970 Length = 1667 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 +RD+ KKRS Sbjct: 367 ARDIGKKRS 375>NP_001278086 Length = 1559 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 +RD+A++RS Sbjct: 847 ARDIARRRS 855>NP_001181876 Length = 1606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 +RD+A++RS Sbjct: 894 ARDIARRRS 902>NP_937887 Length = 1512 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 +RD+A++RS Sbjct: 800 ARDIARRRS 808>NP_937884 Length = 1599 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 +RD+A++RS Sbjct: 887 ARDIARRRS 895>NP_004944 Length = 1404 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 +RD+A++RS Sbjct: 692 ARDIARRRS 700>NP_001181875 Length = 1606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 +RD+A++RS Sbjct: 894 ARDIARRRS 902>NP_937885 Length = 1435 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 +RD+A++RS Sbjct: 723 ARDIARRRS 731>NP_886553 Length = 1600 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 +RD+A++RS Sbjct: 888 ARDIARRRS 896>NP_689836 Length = 515 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DL +KRS Sbjct: 29 SKDLKQKRS 37>NP_001139206 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DL +KRS Sbjct: 29 SKDLKQKRS 37>NP_001163873 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DL +KRS Sbjct: 29 SKDLKQKRS 37>NP_001231892 Length = 2488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DLAK+ S Sbjct: 524 SKDLAKRAS 532>NP_001104488 Length = 2365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DLAK+ S Sbjct: 437 SKDLAKRAS 445>NP_660093 Length = 2429 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DLAK+ S Sbjct: 501 SKDLAKRAS 509>NP_892009 Length = 2432 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DLAK+ S Sbjct: 501 SKDLAKRAS 509>NP_005186 Length = 269 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 SRD AK+R+ Sbjct: 208 SRDKAKRRN 216>XP_006718429 Length = 2416 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DLAK+ S Sbjct: 452 SKDLAKRAS 460>XP_006718428 Length = 2455 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DLAK+ S Sbjct: 524 SKDLAKRAS 532>XP_006718427 Length = 2465 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 S+DLAK+ S Sbjct: 501 SKDLAKRAS 509>NP_001796 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 SRD AK+R Sbjct: 221 SRDKAKRR 228>NP_001274353 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 SRD AK+R+ Sbjct: 334 SRDKAKQRN 342>NP_001272758 Length = 239 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 SRD AK+R+ Sbjct: 180 SRDKAKQRN 188>NP_001274364 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 SRD AK+R+ Sbjct: 285 SRDKAKQRN 293>NP_004355 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 SRD AK+R+ Sbjct: 299 SRDKAKQRN 307>NP_057427 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 S+DL KKR Sbjct: 570 SQDLLKKR 577>NP_060395 Length = 1909 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRDLAKKRS 9 S+DL KRS Sbjct: 1175 SKDLRNKRS 1183>NP_001123361 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKR 8 DLAKKR Sbjct: 146 DLAKKR 151>NP_001913 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 DLAKKR 8 DLAKKR Sbjct: 146 DLAKKR 151>XP_006722770 Length = 1345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 S+DL+++RS Sbjct: 55 SQDLSRRRS 63>XP_006722769 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 S+DL+++RS Sbjct: 71 SQDLSRRRS 79>XP_006722768 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 S+DL+++RS Sbjct: 71 SQDLSRRRS 79>XP_005272521 Length = 1426 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 SRDLAKKRS 9 S+DL+++RS Sbjct: 136 SQDLSRRRS 144>XP_006716870 Length = 1456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRDLAKKRS 9 S+DL KRS Sbjct: 722 SKDLRNKRS 730>XP_006716869 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRDLAKKRS 9 S+DL KRS Sbjct: 988 SKDLRNKRS 996>XP_006716868 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRDLAKKRS 9 S+DL KRS Sbjct: 1224 SKDLRNKRS 1232>XP_006716867 Length = 1958 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SRDLAKKRS 9 S+DL KRS Sbjct: 1224 SKDLRNKRS 1232>NP_003633 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RDLAKKR 8 RDLAK R Sbjct: 368 RDLAKMR 374>NP_060396 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 SRD+ +KR Sbjct: 409 SRDIKRKR 416>NP_001035810 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 S DLAKK+ Sbjct: 40 SGDLAKKK 47>NP_000393 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 S DLAKK+ Sbjct: 70 SGDLAKKK 77>NP_689658 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SRDLAKKRS 9 ++DLAKK + Sbjct: 617 AKDLAKKEA 625>NP_689632 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RDLAKKR 8 RDL KKR Sbjct: 39 RDLDKKR 45>NP_060442 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 SRD+ +KR Sbjct: 404 SRDIKRKR 411>XP_005274715 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 S DLAKK+ Sbjct: 40 SGDLAKKK 47>XP_005274714 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 S DLAKK+ Sbjct: 70 SGDLAKKK 77>XP_006720255 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 SRD+ +KR Sbjct: 409 SRDIKRKR 416>XP_006720254 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SRDLAKKR 8 SRD+ +KR Sbjct: 404 SRDIKRKR 411>XP_005273469 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RDLAKKR 8 RDL KKR Sbjct: 39 RDLDKKR 45>XP_005273468 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RDLAKKR 8 RDL KKR Sbjct: 39 RDLDKKR 45>XP_005273467 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RDLAKKR 8 RDL KKR Sbjct: 39 RDLDKKR 45>XP_005273466 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RDLAKKR 8 RDL KKR Sbjct: 39 RDLDKKR 45>XP_006712871 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RDLAKKR 8 RDLAK R Sbjct: 362 RDLAKMR 368>NP_005137 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RDLAKKRS 9 +DLA+KR+ Sbjct: 214 KDLAEKRA 221Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.117 0.277 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 505,477 Number of extensions: 1212 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |