Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006715 20 509 NP_005913 20 509 XP_005267046 20 509 XP_005267045 20 509 NP_001074319 17 2528 NP_004044 17 4312 NP_207646 16 5631 NP_002200 16 5631 NP_055244 16 5631 NP_001107852 16 5631 XP_006721107 16 5631 XP_005255370 16 5631 XP_005268191 16 5631 XP_005247419 16 5631 NP_001032402 16 5631 NP_056125 16 7355 NP_001364 16 7355 NP_008911 16 7355 NP_079225 16 7355 XP_005273518 16 7355 XP_006716381 16 7355 XP_005250652 16 7355 XP_005250651 16 7355 XP_006716189 16 7355 XP_005250650 16 7355 XP_006714376 16 7355 XP_006714375 16 7355 XP_006711798 16 7355 NP_006256 15 9605 NP_001137481 15 9605 NP_001271230 15 9605 NP_001137482 15 9605 NP_001137480 15 9605 NP_001271231 15 9605 NP_061155 15 9605 NP_001122312 15 9605 NP_001122311 15 9605 NP_000711 15 9605 NP_001137475 15 9605 NP_001137477 15 9605 NP_001137478 15 9605 NP_001137476 15 9605 NP_115928 15 9605 NP_004873 15 9605 NP_064613 15 9605 NP_001161213 15 9605 XP_005262403 15 9605 XP_005262402 15 9605 XP_005262401 15 9605 XP_005262400 15 9605 XP_005262399 15 9605 XP_006715810 15 9605 XP_006715809 15 9605 XP_005248552 15 9605 XP_005265505 15 9605 XP_006713388 15 9605 NP_955469 15 9605 NP_955471 15 9605 NP_955470 15 9605>NP_006715 Length = 1558 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQSNLKEKM 9 S+SNLKEKM Sbjct: 109 SRSNLKEKM 117>NP_005913 Length = 1608 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQSNLKEKM 9 S+SNLKEKM Sbjct: 109 SRSNLKEKM 117>XP_005267046 Length = 1554 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQSNLKEKM 9 S+SNLKEKM Sbjct: 109 SRSNLKEKM 117>XP_005267045 Length = 1604 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQSNLKEKM 9 S+SNLKEKM Sbjct: 109 SRSNLKEKM 117>NP_001074319 Length = 783 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQSNLKEKM 9 SQ+NL+EK+ Sbjct: 334 SQNNLQEKL 342>NP_004044 Length = 437 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SNLKEKM 9 SNLKE+M Sbjct: 239 SNLKERM 245>NP_207646 Length = 2572 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 +SN KEKM Sbjct: 829 ESNSKEKM 836>NP_002200 Length = 1170 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NLKEKM 9 NLKEKM Sbjct: 1120 NLKEKM 1125>NP_055244 Length = 984 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QSNLKEK 8 Q NLKEK Sbjct: 336 QKNLKEK 342>NP_001107852 Length = 1086 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NLKEKM 9 NLKEKM Sbjct: 1036 NLKEKM 1041>XP_006721107 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NLKEKM 9 NLKEKM Sbjct: 1037 NLKEKM 1042>XP_005255370 Length = 1169 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 NLKEKM 9 NLKEKM Sbjct: 1119 NLKEKM 1124>XP_005268191 Length = 2572 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 +SN KEKM Sbjct: 829 ESNSKEKM 836>XP_005247419 Length = 1014 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 QSNLKEK 8 Q NLKEK Sbjct: 336 QKNLKEK 342>NP_001032402 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSNLKEK 8 +SNLKEK Sbjct: 47 KSNLKEK 53>NP_056125 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQSNLKEK 8 SQS+LKE+ Sbjct: 119 SQSHLKEQ 126>NP_001364 Length = 4515 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 ++ NLKEK+ Sbjct: 2846 NRENLKEKL 2854>NP_008911 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S +N+KEK+ Sbjct: 292 SYANIKEKL 300>NP_079225 Length = 1192 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S+SNL EK+ Sbjct: 298 SRSNLAEKV 306>XP_005273518 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQSNLKEK 8 SQS+LKE+ Sbjct: 119 SQSHLKEQ 126>XP_006716381 Length = 1014 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 SQSNLKEK 8 SQS+LKE+ Sbjct: 86 SQSHLKEQ 93>XP_005250652 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S +N+KEK+ Sbjct: 272 SYANIKEKL 280>XP_005250651 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S +N+KEK+ Sbjct: 272 SYANIKEKL 280>XP_006716189 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S +N+KEK+ Sbjct: 292 SYANIKEKL 300>XP_005250650 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S +N+KEK+ Sbjct: 292 SYANIKEKL 300>XP_006714376 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S+SNL EK+ Sbjct: 298 SRSNLAEKV 306>XP_006714375 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S+SNL EK+ Sbjct: 298 SRSNLAEKV 306>XP_006711798 Length = 4586 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 ++ NLKEK+ Sbjct: 2908 NRENLKEKL 2916>NP_006256 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 SQSNLKEKM 9 S SNL EK+ Sbjct: 198 STSNLNEKI 206>NP_001137481 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>NP_001271230 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 Q N+K+KM Sbjct: 676 QVNIKQKM 683>NP_001137482 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>NP_001137480 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>NP_001271231 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 Q N+K+KM Sbjct: 675 QVNIKQKM 682>NP_061155 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 Q N+K+KM Sbjct: 713 QVNIKQKM 720>NP_001122312 Length = 2161 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S+ N+KEK+ Sbjct: 849 SELNMKEKI 857>NP_001122311 Length = 2137 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S+ N+KEK+ Sbjct: 849 SELNMKEKI 857>NP_000711 Length = 2181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S+ N+KEK+ Sbjct: 869 SELNMKEKI 877>NP_001137475 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>NP_001137477 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>NP_001137478 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>NP_001137476 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>NP_115928 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>NP_004873 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S+SN KEK Sbjct: 280 SESNNKEK 287>NP_064613 Length = 1160 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 SQS L+EK Sbjct: 1101 SQSELEEK 1108>NP_001161213 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 +SNL EKM Sbjct: 209 ESNLIEKM 216>XP_005262403 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>XP_005262402 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>XP_005262401 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>XP_005262400 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>XP_005262399 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 S SNL+EK Sbjct: 719 SYSNLEEK 726>XP_006715810 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 Q N+K+KM Sbjct: 676 QVNIKQKM 683>XP_006715809 Length = 1142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 Q N+K+KM Sbjct: 713 QVNIKQKM 720>XP_005248552 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSNLKEKM 9 +SNL EKM Sbjct: 270 ESNLIEKM 277>XP_005265505 Length = 2146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S+ N+KEK+ Sbjct: 849 SELNMKEKI 857>XP_006713388 Length = 2194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 SQSNLKEKM 9 S+ N+KEK+ Sbjct: 869 SELNMKEKI 877>NP_955469 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 SQS L+EK Sbjct: 1097 SQSELEEK 1104>NP_955471 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 SQS L+EK Sbjct: 964 SQSELEEK 971>NP_955470 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 SQSNLKEK 8 SQS L+EK Sbjct: 1002 SQSELEEK 1009Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.286 0.101 0.222 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 576,451 Number of extensions: 816 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |