Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001072990 17 2528 NP_001257943 17 2528 NP_004977 17 2528 XP_006720204 17 2528 XP_006720203 17 2528 XP_006720202 17 2528 XP_006720201 17 2528 NP_001072989 17 2528 NP_001186028 17 4312 NP_001186026 17 4312 NP_001186027 17 4312 NP_001186025 17 4312 NP_003924 17 4312 NP_001273393 17 4312 NP_004314 16 5631 NP_001165886 16 5631 NP_001157819 16 5631 NP_001157814 16 5631 NP_001157816 16 5631 NP_056457 16 5631 NP_001157817 16 5631 NP_001157815 16 5631 NP_001157818 16 5631 NP_001191227 16 5631 NP_689650 16 5631 XP_005247400 16 5631 XP_005247399 16 5631 XP_006713644 16 5631 XP_006713643 16 5631 XP_006713642 16 5631 XP_005247398 16 5631 XP_005247397 16 5631 XP_005247396 16 5631 XP_006713641 16 5631 XP_006713640 16 5631 NP_003972 16 7355 NP_955445 16 7355 NP_001254509 16 7355 XP_006720823 16 7355 XP_006720822 16 7355 XP_005255044 16 7355 XP_005255043 16 7355 NP_006827 15 9605 NP_001269576 15 9605 NP_001027460 15 9605 NP_001269577 15 9605 NP_689936 15 9605>NP_001072990 Length = 1306 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 S+ EALCV+ Sbjct: 297 SEDEALCVV 305>NP_001257943 Length = 1329 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 S+ EALCV+ Sbjct: 297 SEDEALCVV 305>NP_004977 Length = 1300 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 S+ EALCV+ Sbjct: 297 SEDEALCVV 305>XP_006720204 Length = 1298 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 S+ EALCV+ Sbjct: 297 SEDEALCVV 305>XP_006720203 Length = 1328 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 S+ EALCV+ Sbjct: 297 SEDEALCVV 305>XP_006720202 Length = 1329 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 S+ EALCV+ Sbjct: 297 SEDEALCVV 305>XP_006720201 Length = 1357 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 S+ EALCV+ Sbjct: 297 SEDEALCVV 305>NP_001072989 Length = 1357 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 S+ EALCV+ Sbjct: 297 SEDEALCVV 305>NP_001186028 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEALCVL 9 SEALCV+ Sbjct: 737 SEALCVV 743>NP_001186026 Length = 1152 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEALCVL 9 SEALCV+ Sbjct: 765 SEALCVV 771>NP_001186027 Length = 1129 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEALCVL 9 SEALCV+ Sbjct: 742 SEALCVV 748>NP_001186025 Length = 1116 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEALCVL 9 SEALCV+ Sbjct: 729 SEALCVV 735>NP_003924 Length = 1187 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEALCVL 9 SEALCV+ Sbjct: 800 SEALCVV 806>NP_001273393 Length = 1169 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SEALCVL 9 SEALCV+ Sbjct: 782 SEALCVV 788>NP_004314 Length = 345 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSEALCVL 9 Q+EALC L Sbjct: 267 QAEALCKL 274>NP_001165886 Length = 230 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSEALCVL 9 Q+EALC L Sbjct: 152 QAEALCKL 159>NP_001157819 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>NP_001157814 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 166 SQSEALQIL 174>NP_001157816 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>NP_056457 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>NP_001157817 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>NP_001157815 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>NP_001157818 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>NP_001191227 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 181 SQSSSLCI 188Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 209 SQSSSLCI 216Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 237 SQSTSLCI 244>NP_689650 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 181 SQSSSLCI 188Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 209 SQSSSLCI 216Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 237 SQSTSLCI 244>XP_005247400 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>XP_005247399 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>XP_006713644 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>XP_006713643 Length = 668 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 93 SQSEALQIL 101>XP_006713642 Length = 685 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 110 SQSEALQIL 118>XP_005247398 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 166 SQSEALQIL 174>XP_005247397 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 166 SQSEALQIL 174>XP_005247396 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 166 SQSEALQIL 174>XP_006713641 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 166 SQSEALQIL 174>XP_006713640 Length = 741 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 SQSEALCVL 9 SQSEAL +L Sbjct: 166 SQSEALQIL 174>NP_003972 Length = 620 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQSEALC 7 SQ+EA+C Sbjct: 230 SQNEAVC 236>NP_955445 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQSEALC 7 SQ+EA+C Sbjct: 230 SQNEAVC 236>NP_001254509 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQSEALC 7 SQ+EA+C Sbjct: 189 SQNEAVC 195>XP_006720823 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQSEALC 7 SQ+EA+C Sbjct: 230 SQNEAVC 236>XP_006720822 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQSEALC 7 SQ+EA+C Sbjct: 230 SQNEAVC 236>XP_005255044 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQSEALC 7 SQ+EA+C Sbjct: 230 SQNEAVC 236>XP_005255043 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 SQSEALC 7 SQ+EA+C Sbjct: 230 SQNEAVC 236>NP_006827 Length = 2671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EALCVL 9 EALCV+ Sbjct: 645 EALCVI 650>NP_001269576 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 148 SQSHSLCL 155>NP_001027460 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 148 SQSHSLCL 155>NP_001269577 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQSEALCV 8 SQS +LC+ Sbjct: 124 SQSHSLCL 131>NP_689936 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 QSEALCVL 9 QS+ +C+L Sbjct: 73 QSQLICIL 80Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.121 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 573,516 Number of extensions: 538 Number of successful extensions: 51 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |