Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 20 390 NP_036462 20 390 NP_001243397 20 390 XP_005269721 20 390 NP_001121113 17 3301 NP_001017402 17 3301 NP_000219 17 3301 XP_005273181 17 3301 NP_114437 16 7355 XP_006726265 16 7355 XP_006726264 16 7355 XP_006726228 16 7355 XP_006726227 16 7355 XP_005277331 16 7355 XP_006726127 16 7355 XP_006726126 16 7355 XP_006726028 16 7355 XP_006726027 16 7355 XP_006725940 16 7355 XP_006725939 16 7355 XP_005259193 16 7355 XP_005259192 16 7355 XP_005277373 16 7355 XP_005277372 16 7355 XP_005277141 16 7355 XP_005277142 16 7355 XP_005278344 16 7355 XP_005278345 16 7355 XP_005252887 16 7355 XP_005252886 16 7355 NP_001004 16 7355 NP_055870 16 7355 NP_001186732 15 9605 NP_077298 15 9605 NP_001277150 15 9605 NP_001277151 15 9605 NP_000895 15 9605 NP_057133 15 9605 NP_001077054 15 9605 NP_004694 15 9605 XP_005267778 15 9605 XP_005249208 15 9605 XP_006715164 15 9605 XP_005249207 15 9605 XP_006715163 15 9605 XP_005249205 15 9605 XP_005249206 15 9605 XP_006712165 15 9605>NP_001243398 Length = 1781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQRLQTQVA 9 SQRLQTQ+A Sbjct: 1618 SQRLQTQIA 1626>NP_036462 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQRLQTQVA 9 SQRLQTQ+A Sbjct: 1910 SQRLQTQIA 1918>NP_001243397 Length = 1890 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQRLQTQVA 9 SQRLQTQ+A Sbjct: 1727 SQRLQTQIA 1735>XP_005269721 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 SQRLQTQVA 9 SQRLQTQ+A Sbjct: 1910 SQRLQTQIA 1918>NP_001121113 Length = 1172 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQRLQTQVA 9 +QRL+TQV+ Sbjct: 867 AQRLETQVS 875>NP_001017402 Length = 1172 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQRLQTQVA 9 +QRL+TQV+ Sbjct: 867 AQRLETQVS 875>NP_000219 Length = 1172 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQRLQTQVA 9 +QRL+TQV+ Sbjct: 867 AQRLETQVS 875>XP_005273181 Length = 1172 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 SQRLQTQVA 9 +QRL+TQV+ Sbjct: 867 AQRLETQVS 875>NP_114437 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 QRLQ+QV Sbjct: 675 QRLQSQV 681>XP_006726265 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006726264 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006726228 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006726227 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005277331 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006726127 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006726126 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006726028 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006726027 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006725940 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_006725939 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005259193 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005259192 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005277373 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005277372 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005277141 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005277142 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005278344 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005278345 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>XP_005252887 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 226 KRLQTQV 232>XP_005252886 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 317 KRLQTQV 323>NP_001004 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 108 RRLQTQV 114>NP_055870 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QRLQTQV 8 +RLQTQV Sbjct: 375 KRLQTQV 381>NP_001186732 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRLQTQVA 9 +RL+TQV+ Sbjct: 16 ERLETQVS 23>NP_077298 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRLQTQVA 9 +RL+TQV+ Sbjct: 22 ERLETQVS 29>NP_001277150 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 209 SQRLQT 214>NP_001277151 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 171 SQRLQT 176>NP_000895 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 209 SQRLQT 214>NP_057133 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQRLQTQV 8 +QRL TQ+ Sbjct: 188 NQRLNTQI 195>NP_001077054 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQRLQTQV 8 +QRLQT++ Sbjct: 771 AQRLQTEL 778>NP_004694 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 SQRLQTQV 8 +QRLQT++ Sbjct: 804 AQRLQTEL 811>XP_005267778 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 SQRLQTQV 8 +QRL TQ+ Sbjct: 188 NQRLNTQI 195>XP_005249208 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 209 SQRLQT 214>XP_006715164 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 209 SQRLQT 214>XP_005249207 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 209 SQRLQT 214>XP_006715163 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 209 SQRLQT 214>XP_005249205 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 209 SQRLQT 214>XP_005249206 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 SQRLQT 6 SQRLQT Sbjct: 209 SQRLQT 214>XP_006712165 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QRLQTQVA 9 +RL+TQV+ Sbjct: 22 ERLETQVS 29Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.111 0.252 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 343,571 Number of extensions: 566 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |